Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 AC099336.1-201ENST00000417053 1171 ntBASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 CSF2RBP1-201ENST00000447905 391 ntBASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 COX5BP1-201ENST00000507622 393 ntBASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 GCOM2-201ENST00000509133 1104 ntBASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 IGHV3-71-201ENST00000523324 359 ntBASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 AC079316.1-201ENST00000548397 411 ntBASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 RN7SL713P-201ENST00000582127 302 ntBASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 AC017083.2-201ENST00000608069 979 ntBASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 COX11-210ENST00000639671 696 ntBASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC4Q8N9L1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 AL354702.1-201ENST00000442006 1960 ntBASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 PKD1P5-201ENST00000532415 10291 ntBASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 GK-202ENST00000378941 458 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 MIR658-201ENST00000385210 100 ntBASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 AP005482.1-201ENST00000563722 1273 ntBASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 MIR4683-201ENST00000579659 81 ntBASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 BX088702.1-201ENST00000610784 235 ntBASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 MIR6805-201ENST00000615055 62 ntBASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 AC140479.7-201ENST00000636301 2332 ntBASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.24□□□□□ -0.29
ZIC4Q8N9L1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms