Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 AL136309.1-201ENST00000403917 691 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 MIR1247-201ENST00000408206 136 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 MIR663B-201ENST00000408361 115 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 GPAA1P2-201ENST00000417923 928 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 AC007969.1-201ENST00000433675 447 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 ZNF767P-206ENST00000513792 565 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 PPY2P-201ENST00000582808 702 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 AL118558.3-201ENST00000607414 1079 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 AC005695.3-201ENST00000614522 232 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 AL137783.1-201ENST00000623494 1896 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 AC073347.1-201ENST00000421633 2643 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 MROH4P-201ENST00000431302 1578 ntBASIC13.92□□□□□ -0.18
H3F3CQ6NXT2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 AC004945.1-201ENST00000416738 983 ntBASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 HSPB1P2-201ENST00000448722 546 ntBASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 AC104306.2-201ENST00000451877 341 ntBASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 KRT8P13-201ENST00000463294 1010 ntBASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 AC103810.3-201ENST00000583567 96 ntBASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 AL022328.3-201ENST00000607943 679 ntBASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 AC244093.1-201ENST00000610837 814 ntBASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 AL008638.5-201ENST00000623814 1298 ntBASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H3F3CQ6NXT2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
H3F3CQ6NXT2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
H3F3CQ6NXT2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
H3F3CQ6NXT2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H3F3CQ6NXT2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H3F3CQ6NXT2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.9□□□□□ -0.18
H3F3CQ6NXT2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms