Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 AC100827.2-201ENST00000563214 1194 ntBASIC20.58■□□□□ 0.89
CDCA8Q53HL2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 MVK-217ENST00000639206 367 ntTSL 5 BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDCA8Q53HL2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CDCA8Q53HL2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDCA8Q53HL2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDCA8Q53HL2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CDCA8Q53HL2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDCA8Q53HL2 AC046158.3-201ENST00000624947 2558 ntBASIC20.58■□□□□ 0.88
CDCA8Q53HL2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CDCA8Q53HL2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDCA8Q53HL2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CDCA8Q53HL2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDCA8Q53HL2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC20.58■□□□□ 0.88
CDCA8Q53HL2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 AP001258.2-201ENST00000529891 490 ntBASIC20.57■□□□□ 0.88
CDCA8Q53HL2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 MIR4783-201ENST00000580343 82 ntBASIC20.57■□□□□ 0.88
CDCA8Q53HL2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDCA8Q53HL2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 E2F3P2-201ENST00000447755 1422 ntBASIC20.56■□□□□ 0.88
CDCA8Q53HL2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 CICP12-201ENST00000455801 843 ntBASIC20.56■□□□□ 0.88
CDCA8Q53HL2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 AC243960.2-201ENST00000600996 747 ntBASIC20.56■□□□□ 0.88
CDCA8Q53HL2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDCA8Q53HL2 F10-203ENST00000409306 1450 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms