Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 AC109322.1-201ENST00000524499 1264 ntBASIC13.39□□□□□ -0.27
ODF4Q2M2E3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 AC069262.1-201ENST00000539058 672 ntBASIC13.39□□□□□ -0.27
ODF4Q2M2E3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 AC010336.2-201ENST00000564226 506 ntBASIC13.39□□□□□ -0.27
ODF4Q2M2E3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 AC027612.4-201ENST00000605371 583 ntBASIC13.39□□□□□ -0.27
ODF4Q2M2E3 AC074044.1-201ENST00000609673 707 ntBASIC13.39□□□□□ -0.27
ODF4Q2M2E3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 AL928921.2-201ENST00000641325 2442 ntBASIC13.39□□□□□ -0.27
ODF4Q2M2E3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ODF4Q2M2E3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 AC138969.3-201ENST00000546612 1459 ntBASIC13.38□□□□□ -0.27
ODF4Q2M2E3 AC138932.2-201ENST00000548268 1459 ntBASIC13.38□□□□□ -0.27
ODF4Q2M2E3 AC126755.4-201ENST00000549796 1459 ntBASIC13.38□□□□□ -0.27
ODF4Q2M2E3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 LILRP1-201ENST00000444199 1370 ntBASIC13.38□□□□□ -0.27
ODF4Q2M2E3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 Z92544.3-201ENST00000624747 417 ntBASIC13.38□□□□□ -0.27
ODF4Q2M2E3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ODF4Q2M2E3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms