Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCS1Q01581 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCS1Q01581 SLC7A15P-201ENST00000424028 1363 ntBASIC14.52□□□□□ -0.08
HMGCS1Q01581 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCS1Q01581 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCS1Q01581 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.52□□□□□ -0.08
HMGCS1Q01581 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCS1Q01581 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCS1Q01581 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 AC134915.1-201ENST00000426461 574 ntBASIC14.52□□□□□ -0.09
HMGCS1Q01581 AC093004.1-201ENST00000508850 424 ntBASIC14.52□□□□□ -0.09
HMGCS1Q01581 AP001582.1-201ENST00000525856 295 ntBASIC14.52□□□□□ -0.09
HMGCS1Q01581 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 RRP7BP-205ENST00000566851 833 ntBASIC14.52□□□□□ -0.09
HMGCS1Q01581 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 AC007431.3-201ENST00000623221 587 ntBASIC14.52□□□□□ -0.09
HMGCS1Q01581 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCS1Q01581 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCS1Q01581 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCS1Q01581 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCS1Q01581 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCS1Q01581 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCS1Q01581 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCS1Q01581 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HMGCS1Q01581 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 C1QBPP1-201ENST00000400117 770 ntBASIC14.51□□□□□ -0.09
HMGCS1Q01581 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 TSPY16P-201ENST00000449843 468 ntBASIC14.51□□□□□ -0.09
HMGCS1Q01581 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 AC055876.2-201ENST00000531834 546 ntBASIC14.51□□□□□ -0.09
HMGCS1Q01581 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 AL354702.1-201ENST00000442006 1960 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms