Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
EFNA3P52797 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.05□□□□□ -0.16
EFNA3P52797 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.05□□□□□ -0.16
EFNA3P52797 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
EFNA3P52797 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.05□□□□□ -0.16
EFNA3P52797 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.05□□□□□ -0.16
EFNA3P52797 Z93015.1-201ENST00000451718 390 ntBASIC14.05□□□□□ -0.16
EFNA3P52797 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.05□□□□□ -0.16
EFNA3P52797 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
EFNA3P52797 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
EFNA3P52797 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.05□□□□□ -0.16
EFNA3P52797 MIR4525-201ENST00000580000 75 ntBASIC14.05□□□□□ -0.16
EFNA3P52797 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.05□□□□□ -0.16
EFNA3P52797 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
EFNA3P52797 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.05□□□□□ -0.16
EFNA3P52797 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
EFNA3P52797 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
EFNA3P52797 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
EFNA3P52797 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.04□□□□□ -0.16
EFNA3P52797 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
EFNA3P52797 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
EFNA3P52797 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.04□□□□□ -0.16
EFNA3P52797 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
EFNA3P52797 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
EFNA3P52797 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.04□□□□□ -0.16
EFNA3P52797 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.04□□□□□ -0.16
EFNA3P52797 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
EFNA3P52797 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.04□□□□□ -0.16
EFNA3P52797 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.04□□□□□ -0.16
EFNA3P52797 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.04□□□□□ -0.16
EFNA3P52797 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 BRWD1P1-201ENST00000401091 371 ntBASIC14.04□□□□□ -0.16
EFNA3P52797 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.04□□□□□ -0.16
EFNA3P52797 MTX1P1-201ENST00000440904 838 ntBASIC14.04□□□□□ -0.16
EFNA3P52797 HSPB1P2-201ENST00000448722 546 ntBASIC14.04□□□□□ -0.16
EFNA3P52797 AC100850.1-201ENST00000506768 649 ntBASIC14.04□□□□□ -0.16
EFNA3P52797 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.04□□□□□ -0.16
EFNA3P52797 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.04□□□□□ -0.16
EFNA3P52797 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.04□□□□□ -0.16
EFNA3P52797 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.04□□□□□ -0.16
EFNA3P52797 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
EFNA3P52797 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.04□□□□□ -0.16
EFNA3P52797 AL358472.3-201ENST00000608147 415 ntBASIC14.04□□□□□ -0.16
EFNA3P52797 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.04□□□□□ -0.16
EFNA3P52797 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.04□□□□□ -0.16
EFNA3P52797 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
EFNA3P52797 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
EFNA3P52797 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
EFNA3P52797 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.04□□□□□ -0.16
EFNA3P52797 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 AC015818.8-201ENST00000587907 1519 ntBASIC14.04□□□□□ -0.16
EFNA3P52797 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 CICP23-201ENST00000605013 2741 ntBASIC14.04□□□□□ -0.16
EFNA3P52797 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.04□□□□□ -0.16
EFNA3P52797 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNA3P52797 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.03□□□□□ -0.16
EFNA3P52797 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms