Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 TUBB8P8-201ENST00000458717 1058 ntBASIC16.41■□□□□ 0.22
CLCN3P51790 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 GCOM2-201ENST00000509133 1104 ntBASIC16.41■□□□□ 0.22
CLCN3P51790 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.41■□□□□ 0.22
CLCN3P51790 AC131206.1-201ENST00000538078 1211 ntBASIC16.41■□□□□ 0.22
CLCN3P51790 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.41■□□□□ 0.22
CLCN3P51790 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCN3P51790 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.41■□□□□ 0.22
CLCN3P51790 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 NDUFV2P1-201ENST00000596415 907 ntBASIC16.41■□□□□ 0.22
CLCN3P51790 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.41■□□□□ 0.22
CLCN3P51790 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CLCN3P51790 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CLCN3P51790 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLCN3P51790 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN3P51790 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
CLCN3P51790 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN3P51790 AC244394.1-201ENST00000435000 1665 ntBASIC16.4■□□□□ 0.22
CLCN3P51790 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLCN3P51790 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN3P51790 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLCN3P51790 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN3P51790 LINC00528-201ENST00000600723 2160 ntBASIC16.4■□□□□ 0.22
CLCN3P51790 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN3P51790 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN3P51790 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN3P51790 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN3P51790 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN3P51790 SLC25A24P2-201ENST00000415059 510 ntBASIC16.4■□□□□ 0.22
CLCN3P51790 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.4■□□□□ 0.22
CLCN3P51790 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN3P51790 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN3P51790 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.4■□□□□ 0.22
CLCN3P51790 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN3P51790 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLCN3P51790 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.4■□□□□ 0.22
CLCN3P51790 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN3P51790 AC004923.1-202ENST00000642106 209 ntBASIC16.4■□□□□ 0.22
CLCN3P51790 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 AGAP7P-201ENST00000582299 2062 ntBASIC16.4■□□□□ 0.22
CLCN3P51790 AGAP14-201ENST00000624701 2060 ntBASIC16.4■□□□□ 0.22
CLCN3P51790 AC092384.3-202ENST00000564646 2873 ntBASIC16.4■□□□□ 0.22
CLCN3P51790 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLCN3P51790 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN3P51790 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLCN3P51790 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN3P51790 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN3P51790 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN3P51790 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CLCN3P51790 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.39■□□□□ 0.22
CLCN3P51790 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN3P51790 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLCN3P51790 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLCN3P51790 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN3P51790 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN3P51790 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN3P51790 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.39■□□□□ 0.21
CLCN3P51790 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN3P51790 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN3P51790 CYP46A4P-201ENST00000414953 267 ntBASIC16.39■□□□□ 0.21
CLCN3P51790 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.39■□□□□ 0.21
CLCN3P51790 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN3P51790 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.39■□□□□ 0.21
CLCN3P51790 SPTLC1P5-201ENST00000450718 252 ntBASIC16.39■□□□□ 0.21
CLCN3P51790 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.39■□□□□ 0.21
CLCN3P51790 AC106794.1-201ENST00000506935 792 ntBASIC16.39■□□□□ 0.21
CLCN3P51790 AC022217.1-201ENST00000521069 738 ntBASIC16.39■□□□□ 0.21
CLCN3P51790 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.39■□□□□ 0.21
CLCN3P51790 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN3P51790 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms