Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC16.32■□□□□ 0.2
HTTP42858 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTTP42858 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTTP42858 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTTP42858 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTTP42858 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HTTP42858 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HTTP42858 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HTTP42858 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.32■□□□□ 0.2
HTTP42858 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTTP42858 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTTP42858 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.32■□□□□ 0.2
HTTP42858 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.32■□□□□ 0.2
HTTP42858 LILRP1-201ENST00000444199 1370 ntBASIC16.32■□□□□ 0.2
HTTP42858 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HTTP42858 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
HTTP42858 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HTTP42858 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.31■□□□□ 0.2
HTTP42858 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.31■□□□□ 0.2
HTTP42858 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.31■□□□□ 0.2
HTTP42858 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HTTP42858 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 EEF1DP5-201ENST00000431410 772 ntBASIC16.31■□□□□ 0.2
HTTP42858 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.31■□□□□ 0.2
HTTP42858 KRT8P2-201ENST00000556193 944 ntBASIC16.31■□□□□ 0.2
HTTP42858 AC124068.2-201ENST00000569473 1109 ntBASIC16.31■□□□□ 0.2
HTTP42858 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC16.31■□□□□ 0.2
HTTP42858 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.31■□□□□ 0.2
HTTP42858 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
HTTP42858 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
HTTP42858 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HTTP42858 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.31■□□□□ 0.2
HTTP42858 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.31■□□□□ 0.2
HTTP42858 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.31■□□□□ 0.2
HTTP42858 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC16.31■□□□□ 0.2
HTTP42858 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.31■□□□□ 0.2
HTTP42858 AC095040.1-201ENST00000513286 675 ntBASIC16.31■□□□□ 0.2
HTTP42858 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.31■□□□□ 0.2
HTTP42858 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.31■□□□□ 0.2
HTTP42858 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HTTP42858 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTTP42858 AC112693.3-201ENST00000624819 1983 ntBASIC16.31■□□□□ 0.2
HTTP42858 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC16.3■□□□□ 0.2
HTTP42858 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.3■□□□□ 0.2
HTTP42858 AHCYP3-201ENST00000420053 1279 ntBASIC16.3■□□□□ 0.2
HTTP42858 AC104961.1-201ENST00000427605 771 ntBASIC16.3■□□□□ 0.2
HTTP42858 AC006328.1-201ENST00000437571 379 ntBASIC16.3■□□□□ 0.2
HTTP42858 AL035414.1-201ENST00000451327 857 ntBASIC16.3■□□□□ 0.2
HTTP42858 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
HTTP42858 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.3■□□□□ 0.2
HTTP42858 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.3■□□□□ 0.2
HTTP42858 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.3■□□□□ 0.2
HTTP42858 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
HTTP42858 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.3■□□□□ 0.2
HTTP42858 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HTTP42858 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.3■□□□□ 0.2
HTTP42858 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HTTP42858 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.3■□□□□ 0.2
HTTP42858 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC16.3■□□□□ 0.2
HTTP42858 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC16.3■□□□□ 0.2
HTTP42858 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HTTP42858 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HTTP42858 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.3■□□□□ 0.2
HTTP42858 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.3■□□□□ 0.2
HTTP42858 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.3■□□□□ 0.2
HTTP42858 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.3■□□□□ 0.2
HTTP42858 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.3■□□□□ 0.2
HTTP42858 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.3■□□□□ 0.2
HTTP42858 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTTP42858 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.3■□□□□ 0.2
HTTP42858 RN7SL288P-201ENST00000490496 291 ntBASIC16.3■□□□□ 0.2
HTTP42858 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.3■□□□□ 0.2
HTTP42858 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms