Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VARSP26640 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VARSP26640 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
VARSP26640 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.89□□□□□ -0.03
VARSP26640 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 GHSR-202ENST00000427970 912 ntBASIC14.89□□□□□ -0.03
VARSP26640 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.89□□□□□ -0.03
VARSP26640 ACA64.2-201ENST00000459014 129 ntBASIC14.89□□□□□ -0.03
VARSP26640 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.89□□□□□ -0.03
VARSP26640 HMGB3P14-201ENST00000494195 599 ntBASIC14.89□□□□□ -0.03
VARSP26640 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.89□□□□□ -0.03
VARSP26640 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.89□□□□□ -0.03
VARSP26640 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
VARSP26640 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.89□□□□□ -0.03
VARSP26640 AC036164.1-201ENST00000570544 333 ntBASIC14.89□□□□□ -0.03
VARSP26640 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VARSP26640 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VARSP26640 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VARSP26640 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VARSP26640 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
VARSP26640 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VARSP26640 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VARSP26640 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.88□□□□□ -0.03
VARSP26640 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.88□□□□□ -0.03
VARSP26640 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
VARSP26640 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.88□□□□□ -0.03
VARSP26640 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.88□□□□□ -0.03
VARSP26640 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VARSP26640 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VARSP26640 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.88□□□□□ -0.03
VARSP26640 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VARSP26640 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.88□□□□□ -0.03
VARSP26640 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.88□□□□□ -0.03
VARSP26640 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 ACE3P-201ENST00000423435 1973 ntBASIC14.88□□□□□ -0.03
VARSP26640 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.88□□□□□ -0.03
VARSP26640 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.88□□□□□ -0.03
VARSP26640 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 DGCR5-201ENST00000399539 862 ntBASIC14.88□□□□□ -0.03
VARSP26640 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.88□□□□□ -0.03
VARSP26640 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VARSP26640 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
VARSP26640 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VARSP26640 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.88□□□□□ -0.03
VARSP26640 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 RN7SL399P-201ENST00000471648 279 ntBASIC14.88□□□□□ -0.03
VARSP26640 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.88□□□□□ -0.03
VARSP26640 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.88□□□□□ -0.03
VARSP26640 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.88□□□□□ -0.03
VARSP26640 HILS1-202ENST00000545329 423 ntBASIC14.88□□□□□ -0.03
VARSP26640 RN7SL718P-201ENST00000581254 303 ntBASIC14.88□□□□□ -0.03
VARSP26640 AP000845.1-201ENST00000581677 2131 ntBASIC14.88□□□□□ -0.03
VARSP26640 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.88□□□□□ -0.03
VARSP26640 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.88□□□□□ -0.03
VARSP26640 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.88□□□□□ -0.03
VARSP26640 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
VARSP26640 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
VARSP26640 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 CICP17-201ENST00000418553 2377 ntBASIC14.88□□□□□ -0.03
VARSP26640 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VARSP26640 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms