Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.29■□□□□ 0.04
NFKB1P19838 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.29■□□□□ 0.04
NFKB1P19838 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NFKB1P19838 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.29■□□□□ 0.04
NFKB1P19838 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.29■□□□□ 0.04
NFKB1P19838 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.29■□□□□ 0.04
NFKB1P19838 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
NFKB1P19838 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.29■□□□□ 0.04
NFKB1P19838 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NFKB1P19838 AC098614.1-201ENST00000368528 745 ntBASIC15.29■□□□□ 0.04
NFKB1P19838 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NFKB1P19838 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.29■□□□□ 0.04
NFKB1P19838 RN7SL837P-201ENST00000463010 287 ntBASIC15.29■□□□□ 0.04
NFKB1P19838 RN7SL752P-201ENST00000463779 287 ntBASIC15.29■□□□□ 0.04
NFKB1P19838 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.29■□□□□ 0.04
NFKB1P19838 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NFKB1P19838 AC068587.3-201ENST00000526613 355 ntBASIC15.29■□□□□ 0.04
NFKB1P19838 PTP4A1P2-201ENST00000546033 454 ntBASIC15.29■□□□□ 0.04
NFKB1P19838 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.29■□□□□ 0.04
NFKB1P19838 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.29■□□□□ 0.04
NFKB1P19838 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.29■□□□□ 0.04
NFKB1P19838 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.29■□□□□ 0.04
NFKB1P19838 AC145423.3-201ENST00000615987 467 ntBASIC15.29■□□□□ 0.04
NFKB1P19838 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NFKB1P19838 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 SNX18-202ENST00000343017 3140 ntBASIC15.29■□□□□ 0.04
NFKB1P19838 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NFKB1P19838 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.29■□□□□ 0.04
NFKB1P19838 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NFKB1P19838 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.29■□□□□ 0.04
NFKB1P19838 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
NFKB1P19838 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.28■□□□□ 0.04
NFKB1P19838 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.28■□□□□ 0.04
NFKB1P19838 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.28■□□□□ 0.04
NFKB1P19838 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 FO681548.1-201ENST00000455617 1132 ntBASIC15.28■□□□□ 0.04
NFKB1P19838 RN7SL692P-201ENST00000464677 288 ntBASIC15.28■□□□□ 0.04
NFKB1P19838 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.28■□□□□ 0.04
NFKB1P19838 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.28■□□□□ 0.04
NFKB1P19838 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.28■□□□□ 0.04
NFKB1P19838 AC027307.3-201ENST00000594262 1100 ntBASIC15.28■□□□□ 0.04
NFKB1P19838 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.28■□□□□ 0.04
NFKB1P19838 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NFKB1P19838 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NFKB1P19838 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
NFKB1P19838 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NFKB1P19838 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.28■□□□□ 0.04
NFKB1P19838 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.28■□□□□ 0.04
NFKB1P19838 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.28■□□□□ 0.04
NFKB1P19838 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
NFKB1P19838 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NFKB1P19838 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.27■□□□□ 0.04
NFKB1P19838 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms