Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC140658.4-201ENST00000561990 352 ntBASIC24.82■■□□□ 1.56
CFTRP13569 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC24.82■■□□□ 1.56
CFTRP13569 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CFTRP13569 ODCP-201ENST00000459650 1639 ntBASIC24.82■■□□□ 1.56
CFTRP13569 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC24.82■■□□□ 1.56
CFTRP13569 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CFTRP13569 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CFTRP13569 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFTRP13569 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC24.81■■□□□ 1.56
CFTRP13569 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFTRP13569 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC24.81■■□□□ 1.56
CFTRP13569 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFTRP13569 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
CFTRP13569 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CFTRP13569 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC24.81■■□□□ 1.56
CFTRP13569 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CFTRP13569 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC24.81■■□□□ 1.56
CFTRP13569 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CFTRP13569 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC24.81■■□□□ 1.56
CFTRP13569 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFTRP13569 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC24.81■■□□□ 1.56
CFTRP13569 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC24.81■■□□□ 1.56
CFTRP13569 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC24.81■■□□□ 1.56
CFTRP13569 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFTRP13569 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CFTRP13569 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CFTRP13569 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CFTRP13569 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CFTRP13569 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 LINC02199-201ENST00000506655 2702 ntBASIC24.8■■□□□ 1.56
CFTRP13569 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC24.8■■□□□ 1.56
CFTRP13569 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC24.8■■□□□ 1.56
CFTRP13569 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC24.8■■□□□ 1.56
CFTRP13569 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC24.8■■□□□ 1.56
CFTRP13569 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC24.8■■□□□ 1.56
CFTRP13569 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC24.8■■□□□ 1.56
CFTRP13569 SERBP1P2-201ENST00000436888 1164 ntBASIC24.8■■□□□ 1.56
CFTRP13569 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 AC008026.2-201ENST00000495438 348 ntBASIC24.8■■□□□ 1.56
CFTRP13569 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC24.8■■□□□ 1.56
CFTRP13569 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC24.8■■□□□ 1.56
CFTRP13569 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC24.8■■□□□ 1.56
CFTRP13569 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC24.8■■□□□ 1.56
CFTRP13569 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CFTRP13569 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CFTRP13569 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC24.8■■□□□ 1.56
CFTRP13569 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CFTRP13569 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CFTRP13569 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC24.79■■□□□ 1.56
CFTRP13569 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC24.79■■□□□ 1.56
CFTRP13569 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC24.79■■□□□ 1.56
CFTRP13569 OR52M2P-201ENST00000414298 959 ntBASIC24.79■■□□□ 1.56
CFTRP13569 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC24.79■■□□□ 1.56
CFTRP13569 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CFTRP13569 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC24.79■■□□□ 1.56
CFTRP13569 DLK1-205ENST00000556051 469 ntTSL 2 BASIC24.79■■□□□ 1.56
CFTRP13569 AC023968.2-201ENST00000560593 1049 ntBASIC24.79■■□□□ 1.56
CFTRP13569 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC24.79■■□□□ 1.56
CFTRP13569 AC018846.1-201ENST00000568231 183 ntBASIC24.79■■□□□ 1.56
CFTRP13569 GAS7-216ENST00000583882 553 ntTSL 5 BASIC24.79■■□□□ 1.56
CFTRP13569 AP005264.5-201ENST00000590066 467 ntBASIC24.79■■□□□ 1.56
CFTRP13569 NAV1-210ENST00000593583 726 ntBASIC24.79■■□□□ 1.56
CFTRP13569 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC24.79■■□□□ 1.56
CFTRP13569 AC021016.3-201ENST00000608367 477 ntBASIC24.79■■□□□ 1.56
CFTRP13569 AL021707.6-201ENST00000609212 491 ntBASIC24.79■■□□□ 1.56
CFTRP13569 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CFTRP13569 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CFTRP13569 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CFTRP13569 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CFTRP13569 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
CFTRP13569 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC24.79■■□□□ 1.56
CFTRP13569 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC24.78■■□□□ 1.56
CFTRP13569 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 BX679664.3-201ENST00000414070 555 ntBASIC24.78■■□□□ 1.56
CFTRP13569 AC113935.1-201ENST00000471722 555 ntBASIC24.78■■□□□ 1.56
CFTRP13569 SKA2-205ENST00000580541 689 ntTSL 3 BASIC24.78■■□□□ 1.56
CFTRP13569 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 CICP23-201ENST00000605013 2741 ntBASIC24.78■■□□□ 1.56
CFTRP13569 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC24.78■■□□□ 1.56
CFTRP13569 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CFTRP13569 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms