Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AL645929.1-201ENST00000420084 975 ntBASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC245100.5-201ENST00000452108 331 ntBASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AGAP12P-201ENST00000585227 2359 ntBASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC020910.6-201ENST00000623084 1459 ntBASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC005696.4-201ENST00000614400 3147 ntBASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC124319.4-201ENST00000622931 2161 ntBASIC13.13□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC024075.2-201ENST00000598112 1473 ntBASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms