Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 AC234782.1-201ENST00000451950 919 ntBASIC21.28■■□□□ 1
CCDC144AA2RUR9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 CEP164P1-201ENST00000455142 418 ntBASIC21.28■■□□□ 1
CCDC144AA2RUR9 RPS2P36-201ENST00000456516 831 ntBASIC21.28■■□□□ 1
CCDC144AA2RUR9 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC21.28■■□□□ 1
CCDC144AA2RUR9 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC144AA2RUR9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CCDC144AA2RUR9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 FES-204ENST00000414248 2327 ntTSL 2 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC144AA2RUR9 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC21.27■■□□□ 1
CCDC144AA2RUR9 RTN3P1-201ENST00000536295 711 ntBASIC21.27■■□□□ 1
CCDC144AA2RUR9 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC21.27■■□□□ 1
CCDC144AA2RUR9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC21.27■□□□□ 0.99
CCDC144AA2RUR9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
CCDC144AA2RUR9 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC144AA2RUR9 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
CCDC144AA2RUR9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 AC092299.1-201ENST00000632679 757 ntBASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 AC128714.1-201ENST00000637035 887 ntBASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC144AA2RUR9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms