Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 DRD5P1-201ENST00000456605 1438 ntBASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AC018665.1-201ENST00000622927 1362 ntBASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 ACTG1P3-201ENST00000431775 1114 ntBASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AL355864.2-201ENST00000447420 863 ntBASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AC026410.3-201ENST00000514280 936 ntBASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AC106886.1-201ENST00000568660 600 ntBASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AC009486.1-201ENST00000569860 813 ntBASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AC233724.13-201ENST00000598383 410 ntBASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AC093813.1-201ENST00000605066 256 ntBASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PCGF1Q9BSM1 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 AC112693.3-201ENST00000624819 1983 ntBASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 LINC00552-201ENST00000625151 2579 ntBASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PCGF1Q9BSM1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms