Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 DUX4L50-201ENST00000455245 715 ntBASIC21■□□□□ 0.95
SPHKAPQ2M3C7 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 AC138701.2-201ENST00000553634 226 ntBASIC21■□□□□ 0.95
SPHKAPQ2M3C7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 AC087392.5-201ENST00000612517 489 ntBASIC21■□□□□ 0.95
SPHKAPQ2M3C7 AC105137.3-201ENST00000617588 984 ntBASIC21■□□□□ 0.95
SPHKAPQ2M3C7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 AC009560.1-201ENST00000620208 434 ntBASIC21■□□□□ 0.95
SPHKAPQ2M3C7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 LINC01815-202ENST00000641468 1409 ntBASIC21■□□□□ 0.95
SPHKAPQ2M3C7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPHKAPQ2M3C7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 IL9RP3-201ENST00000442856 1674 ntBASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 HIST2H2BA-201ENST00000412169 381 ntBASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 AL161932.2-201ENST00000435436 679 ntBASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 LAP3P2-201ENST00000454686 1454 ntBASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 AJ011931.1-201ENST00000618749 2492 ntBASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 AL354702.1-201ENST00000442006 1960 ntBASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHKAPQ2M3C7 KRT17P5-201ENST00000332088 839 ntBASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 AL591471.1-201ENST00000621855 229 ntBASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 RPL7P35-201ENST00000446943 740 ntBASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHKAPQ2M3C7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SPHKAPQ2M3C7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPHKAPQ2M3C7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPHKAPQ2M3C7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC20.97■□□□□ 0.95
SPHKAPQ2M3C7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
SPHKAPQ2M3C7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPHKAPQ2M3C7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPHKAPQ2M3C7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPHKAPQ2M3C7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPHKAPQ2M3C7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms