Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC18.34■□□□□ 0.53
DDR1Q08345 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.34■□□□□ 0.53
DDR1Q08345 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.34■□□□□ 0.53
DDR1Q08345 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.34■□□□□ 0.53
DDR1Q08345 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.34■□□□□ 0.53
DDR1Q08345 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
DDR1Q08345 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DDR1Q08345 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
DDR1Q08345 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
DDR1Q08345 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDR1Q08345 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.34■□□□□ 0.53
DDR1Q08345 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DDR1Q08345 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
DDR1Q08345 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDR1Q08345 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDR1Q08345 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
DDR1Q08345 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.33■□□□□ 0.53
DDR1Q08345 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.33■□□□□ 0.53
DDR1Q08345 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.33■□□□□ 0.53
DDR1Q08345 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 KRT17P5-201ENST00000332088 839 ntBASIC18.33■□□□□ 0.52
DDR1Q08345 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 STK16-203ENST00000409516 895 ntTSL 2 BASIC18.33■□□□□ 0.52
DDR1Q08345 GUSBP10-201ENST00000417412 665 ntBASIC18.33■□□□□ 0.52
DDR1Q08345 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.33■□□□□ 0.52
DDR1Q08345 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.33■□□□□ 0.52
DDR1Q08345 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 AC093909.3-201ENST00000504783 336 ntBASIC18.33■□□□□ 0.52
DDR1Q08345 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
DDR1Q08345 AC007952.4-201ENST00000573866 637 ntBASIC18.33■□□□□ 0.52
DDR1Q08345 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.33■□□□□ 0.52
DDR1Q08345 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.33■□□□□ 0.52
DDR1Q08345 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.33■□□□□ 0.52
DDR1Q08345 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
DDR1Q08345 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
DDR1Q08345 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.33■□□□□ 0.52
DDR1Q08345 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
DDR1Q08345 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.33■□□□□ 0.52
DDR1Q08345 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.33■□□□□ 0.52
DDR1Q08345 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
DDR1Q08345 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.33■□□□□ 0.52
DDR1Q08345 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.33■□□□□ 0.52
DDR1Q08345 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
DDR1Q08345 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDR1Q08345 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.32■□□□□ 0.52
DDR1Q08345 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.32■□□□□ 0.52
DDR1Q08345 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 KRT8P28-201ENST00000433288 1390 ntBASIC18.32■□□□□ 0.52
DDR1Q08345 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DDR1Q08345 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
DDR1Q08345 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.32■□□□□ 0.52
DDR1Q08345 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.32■□□□□ 0.52
DDR1Q08345 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.32■□□□□ 0.52
DDR1Q08345 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.32■□□□□ 0.52
DDR1Q08345 DPY19L2P5-201ENST00000456300 331 ntBASIC18.32■□□□□ 0.52
DDR1Q08345 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.32■□□□□ 0.52
DDR1Q08345 RNA5SP417-201ENST00000516459 108 ntBASIC18.32■□□□□ 0.52
DDR1Q08345 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC18.32■□□□□ 0.52
DDR1Q08345 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.32■□□□□ 0.52
DDR1Q08345 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.32■□□□□ 0.52
DDR1Q08345 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDR1Q08345 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
DDR1Q08345 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDR1Q08345 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms