Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.07□□□□□ -0.16
EFNA3P52797 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 RN7SKP175-201ENST00000408472 289 ntBASIC14.07□□□□□ -0.16
EFNA3P52797 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.07□□□□□ -0.16
EFNA3P52797 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 AC007969.1-201ENST00000433675 447 ntBASIC14.07□□□□□ -0.16
EFNA3P52797 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 HIST2H2BB-201ENST00000449108 381 ntBASIC14.07□□□□□ -0.16
EFNA3P52797 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.07□□□□□ -0.16
EFNA3P52797 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.07□□□□□ -0.16
EFNA3P52797 MIR4783-201ENST00000580343 82 ntBASIC14.07□□□□□ -0.16
EFNA3P52797 EEF1DP1-201ENST00000585891 896 ntBASIC14.07□□□□□ -0.16
EFNA3P52797 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.07□□□□□ -0.16
EFNA3P52797 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.07□□□□□ -0.16
EFNA3P52797 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.07□□□□□ -0.16
EFNA3P52797 AL096828.3-201ENST00000615354 462 ntBASIC14.07□□□□□ -0.16
EFNA3P52797 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.07□□□□□ -0.16
EFNA3P52797 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.07□□□□□ -0.16
EFNA3P52797 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
EFNA3P52797 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 FKBP4P6-201ENST00000457486 1332 ntBASIC14.07□□□□□ -0.16
EFNA3P52797 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.07□□□□□ -0.16
EFNA3P52797 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.07□□□□□ -0.16
EFNA3P52797 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
EFNA3P52797 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA3P52797 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
EFNA3P52797 AP000593.2-201ENST00000542775 1433 ntBASIC14.07□□□□□ -0.16
EFNA3P52797 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.06□□□□□ -0.16
EFNA3P52797 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.06□□□□□ -0.16
EFNA3P52797 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.06□□□□□ -0.16
EFNA3P52797 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.06□□□□□ -0.16
EFNA3P52797 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.06□□□□□ -0.16
EFNA3P52797 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
EFNA3P52797 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
EFNA3P52797 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
EFNA3P52797 AC004945.1-201ENST00000416738 983 ntBASIC14.06□□□□□ -0.16
EFNA3P52797 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.06□□□□□ -0.16
EFNA3P52797 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.06□□□□□ -0.16
EFNA3P52797 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.06□□□□□ -0.16
EFNA3P52797 AL591846.1-201ENST00000451736 433 ntBASIC14.06□□□□□ -0.16
EFNA3P52797 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.06□□□□□ -0.16
EFNA3P52797 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.06□□□□□ -0.16
EFNA3P52797 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.06□□□□□ -0.16
EFNA3P52797 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.06□□□□□ -0.16
EFNA3P52797 RN7SL219P-201ENST00000582872 296 ntBASIC14.06□□□□□ -0.16
EFNA3P52797 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.06□□□□□ -0.16
EFNA3P52797 GPR182-203ENST00000622922 591 ntBASIC14.06□□□□□ -0.16
EFNA3P52797 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 AC023157.3-201ENST00000619086 2088 ntBASIC14.06□□□□□ -0.16
EFNA3P52797 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.06□□□□□ -0.16
EFNA3P52797 AL138725.1-201ENST00000407347 1314 ntBASIC14.06□□□□□ -0.16
EFNA3P52797 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
EFNA3P52797 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
EFNA3P52797 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
EFNA3P52797 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
EFNA3P52797 AL596257.1-201ENST00000641463 2694 ntBASIC14.06□□□□□ -0.16
EFNA3P52797 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.06□□□□□ -0.16
EFNA3P52797 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA3P52797 AC003102.2-201ENST00000589195 1469 ntBASIC14.06□□□□□ -0.16
EFNA3P52797 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.06□□□□□ -0.16
EFNA3P52797 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.05□□□□□ -0.16
EFNA3P52797 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.05□□□□□ -0.16
EFNA3P52797 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.05□□□□□ -0.16
EFNA3P52797 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.05□□□□□ -0.16
EFNA3P52797 TCAF2P1-201ENST00000291129 2421 ntBASIC14.05□□□□□ -0.16
EFNA3P52797 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.05□□□□□ -0.16
EFNA3P52797 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA3P52797 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
EFNA3P52797 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms