Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SHC1P29353 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SHC1P29353 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SHC1P29353 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.85□□□□□ -0.19
SHC1P29353 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.85□□□□□ -0.19
SHC1P29353 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.85□□□□□ -0.19
SHC1P29353 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 SAMD11P1-201ENST00000571429 661 ntBASIC13.85□□□□□ -0.19
SHC1P29353 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.85□□□□□ -0.19
SHC1P29353 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.85□□□□□ -0.19
SHC1P29353 AC093813.1-201ENST00000605066 256 ntBASIC13.85□□□□□ -0.19
SHC1P29353 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.85□□□□□ -0.19
SHC1P29353 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.85□□□□□ -0.19
SHC1P29353 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.85□□□□□ -0.19
SHC1P29353 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.85□□□□□ -0.19
SHC1P29353 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.85□□□□□ -0.19
SHC1P29353 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SHC1P29353 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
SHC1P29353 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.85□□□□□ -0.19
SHC1P29353 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SHC1P29353 AC015656.1-201ENST00000624209 3578 ntBASIC13.84□□□□□ -0.19
SHC1P29353 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
SHC1P29353 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 MSTO2P-201ENST00000314835 1709 ntBASIC13.84□□□□□ -0.19
SHC1P29353 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.84□□□□□ -0.19
SHC1P29353 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 AC007787.1-201ENST00000588095 1583 ntBASIC13.84□□□□□ -0.19
SHC1P29353 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.84□□□□□ -0.19
SHC1P29353 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.84□□□□□ -0.19
SHC1P29353 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SHC1P29353 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SHC1P29353 TMEM14DP-201ENST00000422205 345 ntBASIC13.84□□□□□ -0.19
SHC1P29353 NME2P1-201ENST00000426182 414 ntBASIC13.84□□□□□ -0.19
SHC1P29353 GHSR-202ENST00000427970 912 ntBASIC13.84□□□□□ -0.19
SHC1P29353 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.84□□□□□ -0.19
SHC1P29353 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.84□□□□□ -0.19
SHC1P29353 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SHC1P29353 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.84□□□□□ -0.19
SHC1P29353 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SHC1P29353 AC010319.3-201ENST00000597028 470 ntBASIC13.84□□□□□ -0.19
SHC1P29353 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 AL645728.2-202ENST00000641679 227 ntBASIC13.84□□□□□ -0.19
SHC1P29353 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SHC1P29353 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SHC1P29353 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHC1P29353 AC093525.8-201ENST00000624099 1342 ntBASIC13.84□□□□□ -0.19
SHC1P29353 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.84□□□□□ -0.19
SHC1P29353 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms