Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD2O14647 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD2O14647 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD2O14647 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD2O14647 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD2O14647 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD2O14647 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD2O14647 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD2O14647 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD2O14647 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD2O14647 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD2O14647 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD2O14647 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
CHD2O14647 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC20.18■□□□□ 0.82
CHD2O14647 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC20.18■□□□□ 0.82
CHD2O14647 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD2O14647 AP000769.1-203ENST00000637245 208 ntBASIC20.18■□□□□ 0.82
CHD2O14647 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CHD2O14647 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CHD2O14647 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.17■□□□□ 0.82
CHD2O14647 PCDHGB8P-201ENST00000502926 1973 ntBASIC20.17■□□□□ 0.82
CHD2O14647 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD2O14647 MSANTD2P1-201ENST00000445341 1368 ntBASIC20.17■□□□□ 0.82
CHD2O14647 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD2O14647 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD2O14647 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD2O14647 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD2O14647 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD2O14647 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC20.17■□□□□ 0.82
CHD2O14647 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CHD2O14647 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD2O14647 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CHD2O14647 AL512599.1-201ENST00000430724 685 ntBASIC20.17■□□□□ 0.82
CHD2O14647 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC20.17■□□□□ 0.82
CHD2O14647 RN7SL788P-201ENST00000460504 316 ntBASIC20.17■□□□□ 0.82
CHD2O14647 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC20.17■□□□□ 0.82
CHD2O14647 KRT18P37-201ENST00000520711 1282 ntBASIC20.17■□□□□ 0.82
CHD2O14647 VENTXP3-201ENST00000546480 773 ntBASIC20.17■□□□□ 0.82
CHD2O14647 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC20.17■□□□□ 0.82
CHD2O14647 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC20.17■□□□□ 0.82
CHD2O14647 AL160191.2-201ENST00000603975 601 ntBASIC20.17■□□□□ 0.82
CHD2O14647 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CHD2O14647 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CHD2O14647 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD2O14647 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD2O14647 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CHD2O14647 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD2O14647 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD2O14647 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CHD2O14647 AC117503.4-201ENST00000623229 1418 ntBASIC20.17■□□□□ 0.82
CHD2O14647 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CHD2O14647 C18orf15-201ENST00000623680 2534 ntBASIC20.16■□□□□ 0.82
CHD2O14647 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CHD2O14647 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
CHD2O14647 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CHD2O14647 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC20.16■□□□□ 0.82
CHD2O14647 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CHD2O14647 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD2O14647 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CHD2O14647 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CHD2O14647 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD2O14647 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD2O14647 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CHD2O14647 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC20.16■□□□□ 0.82
CHD2O14647 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC20.16■□□□□ 0.82
CHD2O14647 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD2O14647 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD2O14647 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD2O14647 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD2O14647 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD2O14647 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CHD2O14647 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.15■□□□□ 0.82
CHD2O14647 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CHD2O14647 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC20.15■□□□□ 0.82
CHD2O14647 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD2O14647 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms