Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 AC005840.4-201ENST00000541242 2494 ntBASIC14.38□□□□□ -0.11
CCDC88CQ9P219 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 C2orf27AP3-201ENST00000434123 579 ntBASIC14.38□□□□□ -0.11
CCDC88CQ9P219 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 AC106820.3-201ENST00000561653 397 ntBASIC14.38□□□□□ -0.11
CCDC88CQ9P219 AL354718.3-201ENST00000616414 581 ntBASIC14.38□□□□□ -0.11
CCDC88CQ9P219 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 CR382287.1-201ENST00000623954 586 ntBASIC14.38□□□□□ -0.11
CCDC88CQ9P219 AC005912.2-201ENST00000619492 2400 ntBASIC14.38□□□□□ -0.11
CCDC88CQ9P219 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC88CQ9P219 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 AL139094.1-201ENST00000405549 1188 ntBASIC14.37□□□□□ -0.11
CCDC88CQ9P219 KLF2P2-201ENST00000416807 1039 ntBASIC14.37□□□□□ -0.11
CCDC88CQ9P219 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 AL118558.3-201ENST00000607414 1079 ntBASIC14.37□□□□□ -0.11
CCDC88CQ9P219 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 INTS4P1-203ENST00000641008 3683 ntBASIC14.37□□□□□ -0.11
CCDC88CQ9P219 AL138799.1-201ENST00000448213 1675 ntBASIC14.37□□□□□ -0.11
CCDC88CQ9P219 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 KRT8P14-201ENST00000414254 1442 ntBASIC14.37□□□□□ -0.11
CCDC88CQ9P219 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 GHSR-202ENST00000427970 912 ntBASIC14.37□□□□□ -0.11
CCDC88CQ9P219 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 AC104306.2-201ENST00000451877 341 ntBASIC14.37□□□□□ -0.11
CCDC88CQ9P219 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 MIR4525-201ENST00000580000 75 ntBASIC14.37□□□□□ -0.11
CCDC88CQ9P219 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC88CQ9P219 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms