Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 AC074338.1-201ENST00000416825 156 ntBASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 SERBP1P3-201ENST00000459980 809 ntBASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 AL079307.3-201ENST00000556114 283 ntBASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 AC025181.2-201ENST00000606994 802 ntBASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CMSS1Q9BQ75 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 AC004461.1-201ENST00000412461 403 ntBASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 SPDYE14P-201ENST00000442619 822 ntBASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 POLD2P1-201ENST00000511220 997 ntBASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 AC026150.2-201ENST00000564693 1156 ntBASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 AL589739.1-201ENST00000607720 493 ntBASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 AL513210.1-201ENST00000629608 234 ntBASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 AC113367.3-201ENST00000508316 1912 ntBASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CMSS1Q9BQ75 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CMSS1Q9BQ75 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms