Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 CD63-210ENST00000550776 870 ntTSL 5 BASIC10.02□□□□□ -0.81
LITAFQ99732 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 SAMD11P1-201ENST00000571429 661 ntBASIC10.02□□□□□ -0.81
LITAFQ99732 AL121772.3-201ENST00000610840 674 ntBASIC10.02□□□□□ -0.81
LITAFQ99732 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
LITAFQ99732 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.02□□□□□ -0.81
LITAFQ99732 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LITAFQ99732 AL157414.3-201ENST00000624276 1954 ntBASIC10.02□□□□□ -0.81
LITAFQ99732 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 AC215219.1-201ENST00000400706 1817 ntBASIC10.02□□□□□ -0.81
LITAFQ99732 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC10.02□□□□□ -0.81
LITAFQ99732 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.02□□□□□ -0.81
LITAFQ99732 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.02□□□□□ -0.81
LITAFQ99732 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LITAFQ99732 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LITAFQ99732 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC10.01□□□□□ -0.81
LITAFQ99732 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC10.01□□□□□ -0.81
LITAFQ99732 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.01□□□□□ -0.81
LITAFQ99732 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC10.01□□□□□ -0.81
LITAFQ99732 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
LITAFQ99732 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
LITAFQ99732 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC10.01□□□□□ -0.81
LITAFQ99732 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
LITAFQ99732 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 HNRNPDP1-201ENST00000439535 754 ntBASIC10.01□□□□□ -0.81
LITAFQ99732 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 RNPS1P1-201ENST00000507437 918 ntBASIC10.01□□□□□ -0.81
LITAFQ99732 SLED1-202ENST00000512051 380 ntBASIC10.01□□□□□ -0.81
LITAFQ99732 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC10.01□□□□□ -0.81
LITAFQ99732 TCAP-202ENST00000578283 583 ntTSL 5 BASIC10.01□□□□□ -0.81
LITAFQ99732 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 AC027307.2-201ENST00000591252 911 ntBASIC10.01□□□□□ -0.81
LITAFQ99732 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LITAFQ99732 TP73-AS1-207ENST00000624167 988 ntBASIC10.01□□□□□ -0.81
LITAFQ99732 AC008267.7-201ENST00000624570 1194 ntBASIC10.01□□□□□ -0.81
LITAFQ99732 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.01□□□□□ -0.81
LITAFQ99732 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.01□□□□□ -0.81
LITAFQ99732 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.01□□□□□ -0.81
LITAFQ99732 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
LITAFQ99732 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
LITAFQ99732 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LITAFQ99732 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.01□□□□□ -0.81
LITAFQ99732 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LITAFQ99732 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms