Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.97□□□□□ -0.17
VRK2Q86Y07 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VRK2Q86Y07 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VRK2Q86Y07 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VRK2Q86Y07 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VRK2Q86Y07 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VRK2Q86Y07 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VRK2Q86Y07 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VRK2Q86Y07 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VRK2Q86Y07 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VRK2Q86Y07 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 AC098850.1-201ENST00000419919 790 ntBASIC13.96□□□□□ -0.17
VRK2Q86Y07 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 NUS1P3-201ENST00000423502 862 ntBASIC13.96□□□□□ -0.17
VRK2Q86Y07 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 AC123567.1-201ENST00000548294 1261 ntBASIC13.96□□□□□ -0.17
VRK2Q86Y07 AL359711.2-201ENST00000563105 872 ntBASIC13.96□□□□□ -0.17
VRK2Q86Y07 AC093726.1-201ENST00000608064 963 ntBASIC13.96□□□□□ -0.17
VRK2Q86Y07 AC099568.2-201ENST00000609194 695 ntBASIC13.96□□□□□ -0.17
VRK2Q86Y07 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.96□□□□□ -0.17
VRK2Q86Y07 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
VRK2Q86Y07 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VRK2Q86Y07 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VRK2Q86Y07 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.96□□□□□ -0.18
VRK2Q86Y07 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.96□□□□□ -0.18
VRK2Q86Y07 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VRK2Q86Y07 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.96□□□□□ -0.18
VRK2Q86Y07 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VRK2Q86Y07 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VRK2Q86Y07 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 RNU1-114P-201ENST00000365297 166 ntBASIC13.95□□□□□ -0.18
VRK2Q86Y07 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 AL139094.1-201ENST00000405549 1188 ntBASIC13.95□□□□□ -0.18
VRK2Q86Y07 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 AC124283.3-201ENST00000570869 594 ntBASIC13.95□□□□□ -0.18
VRK2Q86Y07 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 AC009118.2-201ENST00000613275 655 ntBASIC13.95□□□□□ -0.18
VRK2Q86Y07 AC008761.3-201ENST00000624803 892 ntBASIC13.95□□□□□ -0.18
VRK2Q86Y07 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 PRSS30P-206ENST00000641773 873 ntBASIC13.95□□□□□ -0.18
VRK2Q86Y07 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 KRT8P14-201ENST00000414254 1442 ntBASIC13.95□□□□□ -0.18
VRK2Q86Y07 KRT8P22-201ENST00000562317 1415 ntBASIC13.95□□□□□ -0.18
VRK2Q86Y07 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VRK2Q86Y07 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
VRK2Q86Y07 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms