Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
USP50Q70EL3 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.35■□□□□ 0.37
USP50Q70EL3 RN7SL277P-201ENST00000481521 288 ntBASIC17.35■□□□□ 0.37
USP50Q70EL3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.35■□□□□ 0.37
USP50Q70EL3 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.35■□□□□ 0.37
USP50Q70EL3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.35■□□□□ 0.37
USP50Q70EL3 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.35■□□□□ 0.37
USP50Q70EL3 AC006483.2-201ENST00000609813 515 ntBASIC17.35■□□□□ 0.37
USP50Q70EL3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
USP50Q70EL3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.35■□□□□ 0.37
USP50Q70EL3 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
USP50Q70EL3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.35■□□□□ 0.37
USP50Q70EL3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
USP50Q70EL3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.35■□□□□ 0.37
USP50Q70EL3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP50Q70EL3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.35■□□□□ 0.37
USP50Q70EL3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.35■□□□□ 0.37
USP50Q70EL3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.35■□□□□ 0.37
USP50Q70EL3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
USP50Q70EL3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
USP50Q70EL3 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
USP50Q70EL3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
USP50Q70EL3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
USP50Q70EL3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.34■□□□□ 0.37
USP50Q70EL3 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.34■□□□□ 0.37
USP50Q70EL3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
USP50Q70EL3 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 MIR1301-201ENST00000408518 82 ntBASIC17.34■□□□□ 0.37
USP50Q70EL3 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.34■□□□□ 0.37
USP50Q70EL3 KRT8P28-201ENST00000433288 1390 ntBASIC17.34■□□□□ 0.37
USP50Q70EL3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.34■□□□□ 0.37
USP50Q70EL3 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.34■□□□□ 0.37
USP50Q70EL3 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.34■□□□□ 0.37
USP50Q70EL3 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.34■□□□□ 0.37
USP50Q70EL3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.34■□□□□ 0.37
USP50Q70EL3 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.34■□□□□ 0.37
USP50Q70EL3 AC063952.3-201ENST00000467756 308 ntBASIC17.34■□□□□ 0.37
USP50Q70EL3 AC026470.1-201ENST00000478038 846 ntBASIC17.34■□□□□ 0.37
USP50Q70EL3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.34■□□□□ 0.37
USP50Q70EL3 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.34■□□□□ 0.37
USP50Q70EL3 RNA5SP406-201ENST00000516106 112 ntBASIC17.34■□□□□ 0.37
USP50Q70EL3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.34■□□□□ 0.37
USP50Q70EL3 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.34■□□□□ 0.37
USP50Q70EL3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.34■□□□□ 0.37
USP50Q70EL3 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 AL118522.1-201ENST00000611368 560 ntBASIC17.34■□□□□ 0.37
USP50Q70EL3 AC024909.3-201ENST00000611513 2257 ntBASIC17.34■□□□□ 0.37
USP50Q70EL3 LINC00244-201ENST00000625073 613 ntBASIC17.34■□□□□ 0.37
USP50Q70EL3 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.34■□□□□ 0.37
USP50Q70EL3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
USP50Q70EL3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP50Q70EL3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP50Q70EL3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.33■□□□□ 0.37
USP50Q70EL3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP50Q70EL3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.33■□□□□ 0.37
USP50Q70EL3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.33■□□□□ 0.37
USP50Q70EL3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP50Q70EL3 AL136172.1-201ENST00000598590 1394 ntBASIC17.33■□□□□ 0.36
USP50Q70EL3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.33■□□□□ 0.36
USP50Q70EL3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
USP50Q70EL3 PYY2-201ENST00000315776 282 ntBASIC17.33■□□□□ 0.36
USP50Q70EL3 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP50Q70EL3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.33■□□□□ 0.36
USP50Q70EL3 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.33■□□□□ 0.36
USP50Q70EL3 ST13P19-201ENST00000442505 1124 ntBASIC17.33■□□□□ 0.36
USP50Q70EL3 AC098934.1-203ENST00000442868 1262 ntBASIC17.33■□□□□ 0.36
USP50Q70EL3 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.33■□□□□ 0.36
USP50Q70EL3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.33■□□□□ 0.36
USP50Q70EL3 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.33■□□□□ 0.36
USP50Q70EL3 RN7SL582P-201ENST00000491078 279 ntBASIC17.33■□□□□ 0.36
USP50Q70EL3 AC083801.1-201ENST00000491689 358 ntBASIC17.33■□□□□ 0.36
USP50Q70EL3 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.33■□□□□ 0.36
USP50Q70EL3 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
USP50Q70EL3 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.33■□□□□ 0.36
USP50Q70EL3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.33■□□□□ 0.36
USP50Q70EL3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.33■□□□□ 0.36
USP50Q70EL3 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP50Q70EL3 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP50Q70EL3 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.33■□□□□ 0.36
USP50Q70EL3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP50Q70EL3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms