Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 ACTG1P14-201ENST00000446382 1122 ntBASIC12.06□□□□□ -0.48
FAM78BQ5VT40 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
FAM78BQ5VT40 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 TIMM8BP1-201ENST00000452384 211 ntBASIC12.05□□□□□ -0.48
FAM78BQ5VT40 IGHV3-62-201ENST00000520057 340 ntBASIC12.05□□□□□ -0.48
FAM78BQ5VT40 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 AC026120.1-201ENST00000611536 926 ntBASIC12.05□□□□□ -0.48
FAM78BQ5VT40 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 AC018442.1-201ENST00000421439 2061 ntBASIC12.05□□□□□ -0.48
FAM78BQ5VT40 AP001267.2-201ENST00000532619 2086 ntBASIC12.05□□□□□ -0.48
FAM78BQ5VT40 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms