Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 MIR1233-2-201ENST00000408138 82 ntBASIC11.64□□□□□ -0.55
HIST1H1AQ02539 MIR1233-1-201ENST00000408722 82 ntBASIC11.64□□□□□ -0.55
HIST1H1AQ02539 TSEN15P1-201ENST00000423257 515 ntBASIC11.64□□□□□ -0.55
HIST1H1AQ02539 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 RN7SL618P-201ENST00000477850 296 ntBASIC11.64□□□□□ -0.55
HIST1H1AQ02539 AC125807.1-201ENST00000483097 614 ntBASIC11.64□□□□□ -0.55
HIST1H1AQ02539 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 AC069262.1-201ENST00000539058 672 ntBASIC11.64□□□□□ -0.55
HIST1H1AQ02539 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 AC004449.1-201ENST00000564240 433 ntBASIC11.64□□□□□ -0.55
HIST1H1AQ02539 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 AC027612.4-201ENST00000605371 583 ntBASIC11.64□□□□□ -0.55
HIST1H1AQ02539 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HIST1H1AQ02539 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 INTS4P1-203ENST00000641008 3683 ntBASIC11.63□□□□□ -0.55
HIST1H1AQ02539 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 RPL37AP1-201ENST00000412502 279 ntBASIC11.63□□□□□ -0.55
HIST1H1AQ02539 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 AL512356.2-201ENST00000546955 174 ntBASIC11.63□□□□□ -0.55
HIST1H1AQ02539 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 SPDYE12P-201ENST00000618416 771 ntBASIC11.63□□□□□ -0.55
HIST1H1AQ02539 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HIST1H1AQ02539 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms