Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AL132994.2-201ENST00000603120 687 ntBASIC14.83□□□□□ -0.04
LIMK1P53667 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 YRDCP1-201ENST00000621419 643 ntBASIC14.83□□□□□ -0.04
LIMK1P53667 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LIMK1P53667 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.83□□□□□ -0.04
LIMK1P53667 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LIMK1P53667 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LIMK1P53667 TBC1D3J-201ENST00000620719 1426 ntBASIC14.83□□□□□ -0.04
LIMK1P53667 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.82□□□□□ -0.04
LIMK1P53667 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.82□□□□□ -0.04
LIMK1P53667 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LIMK1P53667 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LIMK1P53667 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 AL627231.1-201ENST00000394467 1125 ntBASIC14.82□□□□□ -0.04
LIMK1P53667 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.82□□□□□ -0.04
LIMK1P53667 AP002803.1-201ENST00000528836 498 ntBASIC14.82□□□□□ -0.04
LIMK1P53667 MIR4649-201ENST00000582839 64 ntBASIC14.82□□□□□ -0.04
LIMK1P53667 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.82□□□□□ -0.04
LIMK1P53667 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.82□□□□□ -0.04
LIMK1P53667 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
LIMK1P53667 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.82□□□□□ -0.04
LIMK1P53667 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.82□□□□□ -0.04
LIMK1P53667 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 AC074138.1-201ENST00000611182 1303 ntBASIC14.82□□□□□ -0.04
LIMK1P53667 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 CICP13-201ENST00000422015 2789 ntBASIC14.82□□□□□ -0.04
LIMK1P53667 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 AC020658.6-201ENST00000623564 1870 ntBASIC14.82□□□□□ -0.04
LIMK1P53667 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK1P53667 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LIMK1P53667 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
LIMK1P53667 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LIMK1P53667 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 AC136621.1-201ENST00000624017 2304 ntBASIC14.81□□□□□ -0.04
LIMK1P53667 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LIMK1P53667 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LIMK1P53667 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMK1P53667 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
LIMK1P53667 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMK1P53667 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.81□□□□□ -0.04
LIMK1P53667 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 RPS9P1-201ENST00000419943 583 ntBASIC14.81□□□□□ -0.04
LIMK1P53667 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK1P53667 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.81□□□□□ -0.04
LIMK1P53667 IGHV3-37-201ENST00000518544 340 ntBASIC14.81□□□□□ -0.04
LIMK1P53667 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.81□□□□□ -0.04
LIMK1P53667 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.81□□□□□ -0.04
LIMK1P53667 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
LIMK1P53667 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMK1P53667 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.81□□□□□ -0.04
LIMK1P53667 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
LIMK1P53667 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMK1P53667 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms