Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 RNA5SP417-201ENST00000516459 108 ntBASIC16.83■□□□□ 0.28
PTPRFP10586 AC009084.3-201ENST00000623356 437 ntBASIC16.83■□□□□ 0.28
PTPRFP10586 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPRFP10586 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPRFP10586 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPRFP10586 AC007950.2-201ENST00000615045 2347 ntBASIC16.83■□□□□ 0.28
PTPRFP10586 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.83■□□□□ 0.28
PTPRFP10586 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.83■□□□□ 0.28
PTPRFP10586 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PTPRFP10586 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPRFP10586 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPRFP10586 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPRFP10586 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTPRFP10586 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPRFP10586 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPRFP10586 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPRFP10586 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PTPRFP10586 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPRFP10586 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPRFP10586 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTPRFP10586 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPRFP10586 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTPRFP10586 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPRFP10586 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPRFP10586 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPRFP10586 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
PTPRFP10586 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 AP000911.2-201ENST00000534330 502 ntBASIC16.82■□□□□ 0.28
PTPRFP10586 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.82■□□□□ 0.28
PTPRFP10586 AC090386.2-201ENST00000623010 1039 ntBASIC16.82■□□□□ 0.28
PTPRFP10586 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 LINC00528-201ENST00000600723 2160 ntBASIC16.82■□□□□ 0.28
PTPRFP10586 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPRFP10586 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPRFP10586 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPRFP10586 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPRFP10586 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PTPRFP10586 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPRFP10586 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 AC011270.2-201ENST00000624293 2550 ntBASIC16.81■□□□□ 0.28
PTPRFP10586 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 KRT17P5-201ENST00000332088 839 ntBASIC16.81■□□□□ 0.28
PTPRFP10586 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPRFP10586 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.81■□□□□ 0.28
PTPRFP10586 RN7SKP109-201ENST00000410592 316 ntBASIC16.81■□□□□ 0.28
PTPRFP10586 ERP29P1-201ENST00000442902 706 ntBASIC16.81■□□□□ 0.28
PTPRFP10586 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.81■□□□□ 0.28
PTPRFP10586 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.81■□□□□ 0.28
PTPRFP10586 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPRFP10586 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PTPRFP10586 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPRFP10586 CICP6-201ENST00000457191 2729 ntBASIC16.81■□□□□ 0.28
PTPRFP10586 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PTPRFP10586 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPRFP10586 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTPRFP10586 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPRFP10586 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPRFP10586 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPRFP10586 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPRFP10586 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPRFP10586 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPRFP10586 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPRFP10586 MIR1227-201ENST00000408484 88 ntBASIC16.8■□□□□ 0.28
PTPRFP10586 PSMD4P1-201ENST00000433951 1109 ntBASIC16.8■□□□□ 0.28
PTPRFP10586 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PTPRFP10586 RN7SL818P-201ENST00000485099 259 ntBASIC16.8■□□□□ 0.28
PTPRFP10586 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPRFP10586 AL022344.2-201ENST00000568976 968 ntBASIC16.8■□□□□ 0.28
PTPRFP10586 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
PTPRFP10586 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTPRFP10586 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPRFP10586 RN7SL725P-201ENST00000606439 259 ntBASIC16.8■□□□□ 0.28
PTPRFP10586 AC002044.2-201ENST00000624910 970 ntBASIC16.8■□□□□ 0.28
PTPRFP10586 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPRFP10586 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPRFP10586 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPRFP10586 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms