Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 LILRP1-201ENST00000444199 1370 ntBASIC15.15■□□□□ 0.02
APOA4P06727 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.15■□□□□ 0.02
APOA4P06727 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.15■□□□□ 0.02
APOA4P06727 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.15■□□□□ 0.02
APOA4P06727 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.15■□□□□ 0.02
APOA4P06727 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 AL442647.2-201ENST00000429864 857 ntBASIC15.15■□□□□ 0.02
APOA4P06727 MYCLP2-201ENST00000449268 967 ntBASIC15.15■□□□□ 0.02
APOA4P06727 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.15■□□□□ 0.02
APOA4P06727 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.15■□□□□ 0.02
APOA4P06727 API5-211ENST00000534695 560 ntTSL 5 BASIC15.15■□□□□ 0.02
APOA4P06727 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.15■□□□□ 0.02
APOA4P06727 SAMD11P1-201ENST00000571429 661 ntBASIC15.15■□□□□ 0.02
APOA4P06727 AC140912.1-201ENST00000577171 1054 ntBASIC15.15■□□□□ 0.02
APOA4P06727 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.15■□□□□ 0.02
APOA4P06727 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.15■□□□□ 0.02
APOA4P06727 CHCHD2P3-201ENST00000603038 451 ntBASIC15.15■□□□□ 0.02
APOA4P06727 AC093813.1-201ENST00000605066 256 ntBASIC15.15■□□□□ 0.02
APOA4P06727 AC107373.2-201ENST00000607735 490 ntBASIC15.15■□□□□ 0.02
APOA4P06727 MIR8072-201ENST00000614241 80 ntBASIC15.15■□□□□ 0.02
APOA4P06727 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.15■□□□□ 0.02
APOA4P06727 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.15■□□□□ 0.02
APOA4P06727 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
APOA4P06727 INTS4P2-202ENST00000614726 2019 ntBASIC15.15■□□□□ 0.02
APOA4P06727 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
APOA4P06727 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.15■□□□□ 0.02
APOA4P06727 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
APOA4P06727 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
APOA4P06727 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.15■□□□□ 0.02
APOA4P06727 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.15■□□□□ 0.02
APOA4P06727 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.15■□□□□ 0.02
APOA4P06727 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
APOA4P06727 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
APOA4P06727 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
APOA4P06727 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.14■□□□□ 0.01
APOA4P06727 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.14■□□□□ 0.01
APOA4P06727 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.14■□□□□ 0.01
APOA4P06727 HSPA7-201ENST00000445535 1927 ntBASIC15.14■□□□□ 0.01
APOA4P06727 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.14■□□□□ 0.01
APOA4P06727 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.14■□□□□ 0.01
APOA4P06727 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.14■□□□□ 0.01
APOA4P06727 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.14■□□□□ 0.01
APOA4P06727 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.14■□□□□ 0.01
APOA4P06727 GAPDHP40-201ENST00000505218 1006 ntBASIC15.14■□□□□ 0.01
APOA4P06727 AC092552.1-201ENST00000547243 906 ntBASIC15.14■□□□□ 0.01
APOA4P06727 AC190387.1-201ENST00000551683 408 ntBASIC15.14■□□□□ 0.01
APOA4P06727 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
APOA4P06727 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.14■□□□□ 0.01
APOA4P06727 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.14■□□□□ 0.01
APOA4P06727 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.14■□□□□ 0.01
APOA4P06727 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.14■□□□□ 0.01
APOA4P06727 TMEM261P1-201ENST00000604899 340 ntBASIC15.14■□□□□ 0.01
APOA4P06727 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.14■□□□□ 0.01
APOA4P06727 AL662799.1-202ENST00000614205 422 ntBASIC15.14■□□□□ 0.01
APOA4P06727 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
APOA4P06727 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.14■□□□□ 0.01
APOA4P06727 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.14■□□□□ 0.01
APOA4P06727 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.14■□□□□ 0.01
APOA4P06727 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
APOA4P06727 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.14■□□□□ 0.01
APOA4P06727 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
APOA4P06727 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
APOA4P06727 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.13■□□□□ 0.01
APOA4P06727 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
APOA4P06727 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.13■□□□□ 0.01
APOA4P06727 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
APOA4P06727 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.13■□□□□ 0.01
APOA4P06727 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
APOA4P06727 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.13■□□□□ 0.01
APOA4P06727 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APOA4P06727 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.13■□□□□ 0.01
APOA4P06727 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
APOA4P06727 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms