Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.2□□□□□ -0.14
PDGFAP04085 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PDGFAP04085 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PDGFAP04085 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.2□□□□□ -0.14
PDGFAP04085 AC106881.1-201ENST00000605849 3329 ntBASIC14.2□□□□□ -0.14
PDGFAP04085 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFAP04085 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PDGFAP04085 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDGFAP04085 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.19□□□□□ -0.14
PDGFAP04085 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PDGFAP04085 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 MTHFR-217ENST00000641820 1569 ntBASIC14.19□□□□□ -0.14
PDGFAP04085 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PDGFAP04085 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.19□□□□□ -0.14
PDGFAP04085 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.19□□□□□ -0.14
PDGFAP04085 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.19□□□□□ -0.14
PDGFAP04085 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.19□□□□□ -0.14
PDGFAP04085 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.19□□□□□ -0.14
PDGFAP04085 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.19□□□□□ -0.14
PDGFAP04085 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.19□□□□□ -0.14
PDGFAP04085 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.19□□□□□ -0.14
PDGFAP04085 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFAP04085 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFAP04085 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFAP04085 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDGFAP04085 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 AC016629.1-201ENST00000596579 586 ntBASIC14.19□□□□□ -0.14
PDGFAP04085 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.19□□□□□ -0.14
PDGFAP04085 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PDGFAP04085 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
PDGFAP04085 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDGFAP04085 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 AC107918.4-201ENST00000641966 3141 ntBASIC14.19□□□□□ -0.14
PDGFAP04085 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDGFAP04085 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFAP04085 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.19□□□□□ -0.14
PDGFAP04085 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.18□□□□□ -0.14
PDGFAP04085 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.18□□□□□ -0.14
PDGFAP04085 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.18□□□□□ -0.14
PDGFAP04085 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.18□□□□□ -0.14
PDGFAP04085 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PDGFAP04085 RNU1-114P-201ENST00000365297 166 ntBASIC14.18□□□□□ -0.14
PDGFAP04085 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.18□□□□□ -0.14
PDGFAP04085 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 EIF4HP1-201ENST00000453115 687 ntBASIC14.18□□□□□ -0.14
PDGFAP04085 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
PDGFAP04085 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.18□□□□□ -0.14
PDGFAP04085 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PDGFAP04085 AC020914.3-201ENST00000594712 304 ntBASIC14.18□□□□□ -0.14
PDGFAP04085 BX539320.1-201ENST00000623759 877 ntBASIC14.18□□□□□ -0.14
PDGFAP04085 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDGFAP04085 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
PDGFAP04085 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDGFAP04085 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.18□□□□□ -0.14
PDGFAP04085 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms