Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CBX6O95503 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CBX6O95503 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.13■□□□□ 0.01
CBX6O95503 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CBX6O95503 COX5BP8-201ENST00000416911 349 ntBASIC15.13■□□□□ 0.01
CBX6O95503 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 RN7SL692P-201ENST00000464677 288 ntBASIC15.13■□□□□ 0.01
CBX6O95503 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 PRYP6-201ENST00000514804 343 ntBASIC15.13■□□□□ 0.01
CBX6O95503 AC027369.6-201ENST00000525520 931 ntBASIC15.13■□□□□ 0.01
CBX6O95503 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CBX6O95503 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.13■□□□□ 0.01
CBX6O95503 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CBX6O95503 AL590560.3-201ENST00000623350 461 ntBASIC15.13■□□□□ 0.01
CBX6O95503 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.13■□□□□ 0.01
CBX6O95503 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.13■□□□□ 0.01
CBX6O95503 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.13■□□□□ 0.01
CBX6O95503 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CBX6O95503 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX6O95503 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 PPT1-213ENST00000641319 2388 ntBASIC15.12■□□□□ 0.01
CBX6O95503 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CBX6O95503 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 AC100757.3-201ENST00000622361 1406 ntBASIC15.12■□□□□ 0.01
CBX6O95503 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CBX6O95503 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.12■□□□□ 0.01
CBX6O95503 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 AC004987.2-201ENST00000395959 1148 ntBASIC15.12■□□□□ 0.01
CBX6O95503 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.12■□□□□ 0.01
CBX6O95503 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.12■□□□□ 0.01
CBX6O95503 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.12■□□□□ 0.01
CBX6O95503 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.12■□□□□ 0.01
CBX6O95503 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.12■□□□□ 0.01
CBX6O95503 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.12■□□□□ 0.01
CBX6O95503 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CBX6O95503 AL356585.2-201ENST00000625078 2396 ntBASIC15.12■□□□□ 0.01
CBX6O95503 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CBX6O95503 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX6O95503 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms