Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.37□□□□□ -0.11
DUX1O43812 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DUX1O43812 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DUX1O43812 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
DUX1O43812 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX1O43812 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX1O43812 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
DUX1O43812 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
DUX1O43812 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX1O43812 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 AL662890.1-201ENST00000396818 632 ntBASIC14.36□□□□□ -0.11
DUX1O43812 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX1O43812 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX1O43812 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.36□□□□□ -0.11
DUX1O43812 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.36□□□□□ -0.11
DUX1O43812 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX1O43812 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.36□□□□□ -0.11
DUX1O43812 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.36□□□□□ -0.11
DUX1O43812 AC106872.11-201ENST00000605838 421 ntBASIC14.36□□□□□ -0.11
DUX1O43812 AC022748.3-201ENST00000621828 275 ntBASIC14.36□□□□□ -0.11
DUX1O43812 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 AC004923.1-202ENST00000642106 209 ntBASIC14.36□□□□□ -0.11
DUX1O43812 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX1O43812 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX1O43812 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.36□□□□□ -0.11
DUX1O43812 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
DUX1O43812 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.36□□□□□ -0.11
DUX1O43812 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
DUX1O43812 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.36□□□□□ -0.11
DUX1O43812 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX1O43812 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
DUX1O43812 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.35□□□□□ -0.11
DUX1O43812 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
DUX1O43812 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 E2F3P2-201ENST00000447755 1422 ntBASIC14.35□□□□□ -0.11
DUX1O43812 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.35□□□□□ -0.11
DUX1O43812 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.35□□□□□ -0.11
DUX1O43812 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
DUX1O43812 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.35□□□□□ -0.11
DUX1O43812 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
DUX1O43812 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.35□□□□□ -0.11
DUX1O43812 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.35□□□□□ -0.11
DUX1O43812 AC079328.1-201ENST00000560358 952 ntBASIC14.35□□□□□ -0.11
DUX1O43812 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.35□□□□□ -0.11
DUX1O43812 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.35□□□□□ -0.11
DUX1O43812 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
DUX1O43812 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DUX1O43812 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DUX1O43812 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 AC006058.4-201ENST00000624016 1670 ntBASIC14.35□□□□□ -0.11
DUX1O43812 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
DUX1O43812 REXO1L2P-201ENST00000425429 2069 ntBASIC14.35□□□□□ -0.11
DUX1O43812 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX1O43812 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms