Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00473A8K010 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LINC00473A8K010 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00473A8K010 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00473A8K010 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00473A8K010 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00473A8K010 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LINC00473A8K010 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC00473A8K010 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC00473A8K010 AL512638.1-201ENST00000457493 794 ntBASIC12.29□□□□□ -0.44
LINC00473A8K010 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00473A8K010 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00473A8K010 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00473A8K010 AC093813.1-201ENST00000605066 256 ntBASIC12.29□□□□□ -0.44
LINC00473A8K010 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00473A8K010 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
LINC00473A8K010 CICP4-201ENST00000447359 2812 ntBASIC12.29□□□□□ -0.44
LINC00473A8K010 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
LINC00473A8K010 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC00473A8K010 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00473A8K010 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00473A8K010 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00473A8K010 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00473A8K010 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00473A8K010 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00473A8K010 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00473A8K010 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00473A8K010 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LINC00473A8K010 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00473A8K010 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC00473A8K010 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LINC00473A8K010 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC00473A8K010 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00473A8K010 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00473A8K010 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00473A8K010 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00473A8K010 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00473A8K010 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00473A8K010 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00473A8K010 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00473A8K010 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00473A8K010 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 RPL13AP25-201ENST00000484130 612 ntBASIC12.28□□□□□ -0.44
LINC00473A8K010 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00473A8K010 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00473A8K010 AC022447.6-201ENST00000515522 438 ntBASIC12.28□□□□□ -0.44
LINC00473A8K010 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00473A8K010 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00473A8K010 BRI3BPP1-201ENST00000594224 787 ntBASIC12.28□□□□□ -0.44
LINC00473A8K010 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00473A8K010 AC106028.4-201ENST00000614509 607 ntBASIC12.28□□□□□ -0.44
LINC00473A8K010 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LINC00473A8K010 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00473A8K010 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC00473A8K010 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00473A8K010 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
LINC00473A8K010 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00473A8K010 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00473A8K010 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00473A8K010 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
LINC00473A8K010 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00473A8K010 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC00473A8K010 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00473A8K010 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00473A8K010 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LINC00473A8K010 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00473A8K010 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LINC00473A8K010 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.44
LINC00473A8K010 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
LINC00473A8K010 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
LINC00473A8K010 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00473A8K010 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00473A8K010 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00473A8K010 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00473A8K010 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00473A8K010 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.27□□□□□ -0.44
LINC00473A8K010 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00473A8K010 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00473A8K010 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00473A8K010 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00473A8K010 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00473A8K010 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00473A8K010 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LINC00473A8K010 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms