Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 AC009486.1-201ENST00000569860 813 ntBASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 AC005252.2-201ENST00000624630 1141 ntBASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHB1Q9Y5F3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 CICP23-201ENST00000605013 2741 ntBASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 GPAA1P2-201ENST00000417923 928 ntBASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 HLA-K-203ENST00000430151 1046 ntBASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 AC093433.1-201ENST00000458048 571 ntBASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 KRT90P-201ENST00000549264 1064 ntBASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 RN7SL560P-201ENST00000577943 264 ntBASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 AC091271.1-201ENST00000611877 1162 ntBASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 AL161772.1-201ENST00000610494 4412 ntBASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 AC023824.1-201ENST00000562945 2975 ntBASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PCDHB1Q9Y5F3 CICP24-201ENST00000605464 2705 ntBASIC15.08■□□□□ 0.01
PCDHB1Q9Y5F3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.08■□□□□ 0.01
PCDHB1Q9Y5F3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHB1Q9Y5F3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.08■□□□□ 0.01
PCDHB1Q9Y5F3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
PCDHB1Q9Y5F3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHB1Q9Y5F3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms