Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1L1Q9UHC9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 HNRNPA1P27-201ENST00000412087 955 ntBASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 AC006033.1-201ENST00000440505 426 ntBASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 AL606495.2-201ENST00000605867 535 ntBASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NPC1L1Q9UHC9 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 HLA-J-204ENST00000495278 958 ntBASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 AL160314.3-201ENST00000556041 767 ntBASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 AC100827.2-201ENST00000563214 1194 ntBASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 DBET-201ENST00000630918 3363 ntBASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 FES-203ENST00000394302 2133 ntTSL 5 BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1L1Q9UHC9 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 KRT18P36-201ENST00000411618 1276 ntBASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 PFN1P12-201ENST00000455938 534 ntBASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 AC006122.1-201ENST00000493323 440 ntBASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 AC126915.1-201ENST00000522847 1038 ntBASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 AC091271.1-201ENST00000611877 1162 ntBASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 AC068587.8-201ENST00000641239 219 ntBASIC19.95■□□□□ 0.79
NPC1L1Q9UHC9 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 AC215219.1-201ENST00000400706 1817 ntBASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 LINC00552-201ENST00000625151 2579 ntBASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 FAM90A7P-201ENST00000382628 1395 ntBASIC19.95■□□□□ 0.78
NPC1L1Q9UHC9 FAM90A23P-201ENST00000400136 1395 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms