Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.46□□□□□ -0.09
ZNF248Q8NDW4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.46□□□□□ -0.09
ZNF248Q8NDW4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF248Q8NDW4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.46□□□□□ -0.09
ZNF248Q8NDW4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF248Q8NDW4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF248Q8NDW4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ZNF248Q8NDW4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF248Q8NDW4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ZNF248Q8NDW4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF248Q8NDW4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF248Q8NDW4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 CICP6-201ENST00000457191 2729 ntBASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 AC024681.1-201ENST00000521917 487 ntBASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 ZACNP1-201ENST00000612259 710 ntBASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 AL023803.2-201ENST00000620080 638 ntBASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF248Q8NDW4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AC006480.2-201ENST00000609770 1337 ntBASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AL596276.2-201ENST00000447525 331 ntBASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AC021723.1-201ENST00000486306 515 ntBASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AC106794.1-201ENST00000506935 792 ntBASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AC022217.1-201ENST00000521069 738 ntBASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 MIR4750-201ENST00000584564 56 ntBASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF248Q8NDW4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms