Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 CALR4P-201ENST00000431943 946 ntBASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 BX284668.4-201ENST00000453917 508 ntBASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 AC020914.3-201ENST00000594712 304 ntBASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 AC138028.6-201ENST00000616106 1482 ntBASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 AC013726.1-201ENST00000563747 2285 ntBASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 KRT8P29-201ENST00000420409 1371 ntBASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 AGAP7P-201ENST00000582299 2062 ntBASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 AGAP14-201ENST00000624701 2060 ntBASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 LINC00528-201ENST00000600723 2160 ntBASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 CICP23-201ENST00000605013 2741 ntBASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
UBE3BQ7Z3V4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 DUX4L46-201ENST00000566845 751 ntBASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms