Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 BAATP1-201ENST00000412284 1225 ntBASIC15.87■□□□□ 0.13
RNF43Q68DV7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 AC243960.2-201ENST00000600996 747 ntBASIC15.87■□□□□ 0.13
RNF43Q68DV7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 MSTO2P-201ENST00000314835 1709 ntBASIC15.87■□□□□ 0.13
RNF43Q68DV7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 AC148477.4-201ENST00000613430 1793 ntBASIC15.87■□□□□ 0.13
RNF43Q68DV7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF43Q68DV7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF43Q68DV7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 ELK2AP-201ENST00000392510 1007 ntBASIC15.86■□□□□ 0.13
RNF43Q68DV7 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.86■□□□□ 0.13
RNF43Q68DV7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 GNRHR2-203ENST00000581100 1187 ntBASIC15.86■□□□□ 0.13
RNF43Q68DV7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF43Q68DV7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF43Q68DV7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF43Q68DV7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF43Q68DV7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms