Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 DKKL1P1-201ENST00000400550 698 ntBASIC12.81□□□□□ -0.36
LRRK2Q5S007 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 AC009090.5-201ENST00000624886 2285 ntBASIC12.81□□□□□ -0.36
LRRK2Q5S007 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.81□□□□□ -0.36
LRRK2Q5S007 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LRRK2Q5S007 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 TMBIM7P-202ENST00000641474 1516 ntBASIC12.8□□□□□ -0.36
LRRK2Q5S007 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 CICP11-201ENST00000434745 2827 ntBASIC12.8□□□□□ -0.36
LRRK2Q5S007 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 AL137077.2-201ENST00000635124 1608 ntBASIC12.8□□□□□ -0.36
LRRK2Q5S007 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 PYY2-201ENST00000315776 282 ntBASIC12.8□□□□□ -0.36
LRRK2Q5S007 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 AC098657.1-201ENST00000416270 1135 ntBASIC12.8□□□□□ -0.36
LRRK2Q5S007 AHCYP3-201ENST00000420053 1279 ntBASIC12.8□□□□□ -0.36
LRRK2Q5S007 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 AC006116.2-201ENST00000589958 988 ntBASIC12.8□□□□□ -0.36
LRRK2Q5S007 APOC1-209ENST00000592885 562 ntTSL 3 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LRRK2Q5S007 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 MAGEA7P-201ENST00000436482 942 ntBASIC12.8□□□□□ -0.36
LRRK2Q5S007 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 AC092896.1-201ENST00000465850 380 ntBASIC12.8□□□□□ -0.36
LRRK2Q5S007 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 RN7SL602P-201ENST00000578326 324 ntBASIC12.8□□□□□ -0.36
LRRK2Q5S007 RN7SL718P-201ENST00000581254 303 ntBASIC12.8□□□□□ -0.36
LRRK2Q5S007 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.8□□□□□ -0.36
LRRK2Q5S007 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 HLF-202ENST00000430986 1385 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms