Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 ACE3P-201ENST00000423435 1973 ntBASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 PDIA3P2-201ENST00000428073 158 ntBASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 AC073150.1-201ENST00000450406 1084 ntBASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 RCC2P8-201ENST00000502779 1035 ntBASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 GCOM2-201ENST00000509133 1104 ntBASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 AC116345.2-201ENST00000512837 523 ntBASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 AC131206.1-201ENST00000538078 1211 ntBASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 AL157791.1-201ENST00000553667 1699 ntBASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.42■□□□□ 0.38
SHROOM1Q2M3G4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 AL645933.1-201ENST00000440087 609 ntBASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 RN7SL190P-201ENST00000582519 257 ntBASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 MIR6720-201ENST00000611664 98 ntBASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.41■□□□□ 0.38
SHROOM1Q2M3G4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 CYP4F23P-201ENST00000593402 1579 ntBASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms