Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.45□□□□□ -0.26
HOXC12P31275 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.45□□□□□ -0.26
HOXC12P31275 AC134312.5-201ENST00000568031 1313 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HOXC12P31275 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HOXC12P31275 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.45□□□□□ -0.26
HOXC12P31275 AL031595.1-201ENST00000623969 4709 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 AC009090.5-201ENST00000624886 2285 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
HOXC12P31275 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.45□□□□□ -0.26
HOXC12P31275 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 BAATP1-201ENST00000412284 1225 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.45□□□□□ -0.26
HOXC12P31275 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.45□□□□□ -0.26
HOXC12P31275 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 C2orf27AP3-201ENST00000434123 579 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 YBX1P6-201ENST00000442962 1002 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
HOXC12P31275 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.45□□□□□ -0.26
HOXC12P31275 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.45□□□□□ -0.26
HOXC12P31275 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.45□□□□□ -0.26
HOXC12P31275 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.45□□□□□ -0.26
HOXC12P31275 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.45□□□□□ -0.26
HOXC12P31275 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.45□□□□□ -0.26
HOXC12P31275 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.45□□□□□ -0.26
HOXC12P31275 AC010328.2-201ENST00000597698 1111 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 AC243960.2-201ENST00000600996 747 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HOXC12P31275 AL354718.3-201ENST00000616414 581 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 CR382287.1-201ENST00000623954 586 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 AC005252.2-201ENST00000624630 1141 ntBASIC13.45□□□□□ -0.26
HOXC12P31275 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.45□□□□□ -0.26
HOXC12P31275 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
HOXC12P31275 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.45□□□□□ -0.26
HOXC12P31275 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.45□□□□□ -0.26
HOXC12P31275 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HOXC12P31275 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
HOXC12P31275 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HOXC12P31275 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HOXC12P31275 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.45□□□□□ -0.26
HOXC12P31275 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.44□□□□□ -0.26
HOXC12P31275 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
HOXC12P31275 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 KRT8P35-201ENST00000483942 1338 ntBASIC13.44□□□□□ -0.26
HOXC12P31275 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 ACKR1-201ENST00000368121 1240 ntBASIC13.44□□□□□ -0.26
HOXC12P31275 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.44□□□□□ -0.26
HOXC12P31275 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.44□□□□□ -0.26
HOXC12P31275 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 KRT8P13-201ENST00000463294 1010 ntBASIC13.44□□□□□ -0.26
HOXC12P31275 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.44□□□□□ -0.26
HOXC12P31275 GAPDHP40-201ENST00000505218 1006 ntBASIC13.44□□□□□ -0.26
HOXC12P31275 AP001889.1-201ENST00000525414 633 ntBASIC13.44□□□□□ -0.26
HOXC12P31275 AC079316.1-201ENST00000548397 411 ntBASIC13.44□□□□□ -0.26
HOXC12P31275 RHOQP1-201ENST00000555758 579 ntBASIC13.44□□□□□ -0.26
HOXC12P31275 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.44□□□□□ -0.26
HOXC12P31275 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HOXC12P31275 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HOXC12P31275 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
HOXC12P31275 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.44□□□□□ -0.26
HOXC12P31275 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HOXC12P31275 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms