Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.95□□□□□ -0.02
VARSP26640 DGCR9-201ENST00000609630 2415 ntBASIC14.95□□□□□ -0.02
VARSP26640 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VARSP26640 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.95□□□□□ -0.02
VARSP26640 AL356585.2-201ENST00000625078 2396 ntBASIC14.95□□□□□ -0.02
VARSP26640 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VARSP26640 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
VARSP26640 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VARSP26640 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.95□□□□□ -0.02
VARSP26640 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.95□□□□□ -0.02
VARSP26640 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.95□□□□□ -0.02
VARSP26640 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.95□□□□□ -0.02
VARSP26640 AC023310.3-201ENST00000557027 670 ntBASIC14.95□□□□□ -0.02
VARSP26640 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.95□□□□□ -0.02
VARSP26640 AC100756.1-201ENST00000562736 682 ntBASIC14.95□□□□□ -0.02
VARSP26640 AC138749.3-201ENST00000567691 622 ntBASIC14.95□□□□□ -0.02
VARSP26640 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.95□□□□□ -0.02
VARSP26640 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.95□□□□□ -0.02
VARSP26640 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.95□□□□□ -0.02
VARSP26640 AL391069.4-201ENST00000609583 481 ntBASIC14.95□□□□□ -0.02
VARSP26640 AC116165.1-201ENST00000611806 668 ntBASIC14.95□□□□□ -0.02
VARSP26640 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.95□□□□□ -0.02
VARSP26640 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.95□□□□□ -0.02
VARSP26640 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VARSP26640 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.95□□□□□ -0.02
VARSP26640 WASH3P-207ENST00000560956 1394 ntBASIC14.95□□□□□ -0.02
VARSP26640 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 AC007326.2-201ENST00000624224 7579 ntBASIC14.95□□□□□ -0.02
VARSP26640 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VARSP26640 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VARSP26640 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VARSP26640 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VARSP26640 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VARSP26640 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.94□□□□□ -0.02
VARSP26640 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
VARSP26640 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VARSP26640 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.94□□□□□ -0.02
VARSP26640 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.94□□□□□ -0.02
VARSP26640 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC14.94□□□□□ -0.02
VARSP26640 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.94□□□□□ -0.02
VARSP26640 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.94□□□□□ -0.02
VARSP26640 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
VARSP26640 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.94□□□□□ -0.02
VARSP26640 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VARSP26640 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.94□□□□□ -0.02
VARSP26640 AC000095.1-201ENST00000603208 874 ntBASIC14.94□□□□□ -0.02
VARSP26640 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.94□□□□□ -0.02
VARSP26640 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VARSP26640 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
VARSP26640 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.94□□□□□ -0.02
VARSP26640 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.93□□□□□ -0.02
VARSP26640 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 AC118758.2-201ENST00000614242 2813 ntBASIC14.93□□□□□ -0.02
VARSP26640 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms