Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 AC006001.1-201ENST00000325130 474 ntBASIC14.14□□□□□ -0.15
CTNSO60931 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CTNSO60931 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.14□□□□□ -0.15
CTNSO60931 FAM197Y7-201ENST00000432892 766 ntBASIC14.14□□□□□ -0.15
CTNSO60931 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.14□□□□□ -0.15
CTNSO60931 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CTNSO60931 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.14□□□□□ -0.15
CTNSO60931 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.14□□□□□ -0.15
CTNSO60931 RHOXF1P1-202ENST00000635473 501 ntBASIC14.14□□□□□ -0.15
CTNSO60931 AC006453.4-201ENST00000636949 1252 ntBASIC14.14□□□□□ -0.15
CTNSO60931 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.14□□□□□ -0.15
CTNSO60931 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.14□□□□□ -0.15
CTNSO60931 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CTNSO60931 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTNSO60931 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CTNSO60931 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.14□□□□□ -0.15
CTNSO60931 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CTNSO60931 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CTNSO60931 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CTNSO60931 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 AC126755.1-201ENST00000525846 6405 ntBASIC14.13□□□□□ -0.15
CTNSO60931 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CTNSO60931 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.13□□□□□ -0.15
CTNSO60931 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.13□□□□□ -0.15
CTNSO60931 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.13□□□□□ -0.15
CTNSO60931 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CTNSO60931 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 OR8S1-201ENST00000310194 1080 ntBASIC14.13□□□□□ -0.15
CTNSO60931 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.13□□□□□ -0.15
CTNSO60931 MIR1909-201ENST00000411312 80 ntBASIC14.13□□□□□ -0.15
CTNSO60931 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.13□□□□□ -0.15
CTNSO60931 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.13□□□□□ -0.15
CTNSO60931 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.13□□□□□ -0.15
CTNSO60931 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.13□□□□□ -0.15
CTNSO60931 FTLP10-202ENST00000505798 471 ntBASIC14.13□□□□□ -0.15
CTNSO60931 AC104989.1-201ENST00000519711 778 ntBASIC14.13□□□□□ -0.15
CTNSO60931 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CTNSO60931 HILS1-202ENST00000545329 423 ntBASIC14.13□□□□□ -0.15
CTNSO60931 AC078819.1-201ENST00000547454 765 ntBASIC14.13□□□□□ -0.15
CTNSO60931 AC012085.1-201ENST00000548270 765 ntBASIC14.13□□□□□ -0.15
CTNSO60931 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.13□□□□□ -0.15
CTNSO60931 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.13□□□□□ -0.15
CTNSO60931 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.13□□□□□ -0.15
CTNSO60931 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.13□□□□□ -0.15
CTNSO60931 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.13□□□□□ -0.15
CTNSO60931 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CTNSO60931 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CTNSO60931 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.13□□□□□ -0.15
CTNSO60931 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.13□□□□□ -0.15
CTNSO60931 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CTNSO60931 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.13□□□□□ -0.15
CTNSO60931 CLUHP2-201ENST00000426660 1303 ntBASIC14.13□□□□□ -0.15
CTNSO60931 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.13□□□□□ -0.15
CTNSO60931 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CTNSO60931 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CTNSO60931 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms