Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC148477.4-201ENST00000613430 1793 ntBASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 OR2I1P-209ENST00000641730 5365 ntBASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 AC007274.1-201ENST00000439805 662 ntBASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 MIR4259-201ENST00000584466 101 ntBASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 AC132938.4-201ENST00000623835 848 ntBASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSBP3Q9BWW4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 SNX18-202ENST00000343017 3140 ntBASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 FAM21FP-201ENST00000426241 1131 ntBASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 GHSR-202ENST00000427970 912 ntBASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 AC138951.2-201ENST00000623455 1161 ntBASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.65□□□□□ -0.38
SSBP3Q9BWW4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.65□□□□□ -0.39
SSBP3Q9BWW4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
SSBP3Q9BWW4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.65□□□□□ -0.39
SSBP3Q9BWW4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.65□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms