Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 PSMD4P1-201ENST00000433951 1109 ntBASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 RN7SL818P-201ENST00000485099 259 ntBASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 RN7SL725P-201ENST00000606439 259 ntBASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL27A1Q8IZC6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
COL27A1Q8IZC6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
COL27A1Q8IZC6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL27A1Q8IZC6 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 AC095040.1-201ENST00000513286 675 ntBASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL27A1Q8IZC6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 AC006158.1-201ENST00000610661 249 ntBASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 AC067931.2-201ENST00000623655 2003 ntBASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL27A1Q8IZC6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms