Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14□□□□□ -0.17
VRK2Q86Y07 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
VRK2Q86Y07 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14□□□□□ -0.17
VRK2Q86Y07 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
VRK2Q86Y07 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14□□□□□ -0.17
VRK2Q86Y07 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14□□□□□ -0.17
VRK2Q86Y07 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14□□□□□ -0.17
VRK2Q86Y07 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14□□□□□ -0.17
VRK2Q86Y07 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14□□□□□ -0.17
VRK2Q86Y07 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14□□□□□ -0.17
VRK2Q86Y07 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VRK2Q86Y07 CYMP-203ENST00000474680 1263 ntBASIC14□□□□□ -0.17
VRK2Q86Y07 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14□□□□□ -0.17
VRK2Q86Y07 RPL13AP25-201ENST00000484130 612 ntBASIC14□□□□□ -0.17
VRK2Q86Y07 INGX-202ENST00000489074 768 ntBASIC14□□□□□ -0.17
VRK2Q86Y07 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14□□□□□ -0.17
VRK2Q86Y07 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14□□□□□ -0.17
VRK2Q86Y07 RRP7BP-205ENST00000566851 833 ntBASIC14□□□□□ -0.17
VRK2Q86Y07 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14□□□□□ -0.17
VRK2Q86Y07 AC093813.1-201ENST00000605066 256 ntBASIC14□□□□□ -0.17
VRK2Q86Y07 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14□□□□□ -0.17
VRK2Q86Y07 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 LINC01230-201ENST00000625222 3017 ntBASIC14□□□□□ -0.17
VRK2Q86Y07 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VRK2Q86Y07 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 SLC7A15P-201ENST00000424028 1363 ntBASIC13.99□□□□□ -0.17
VRK2Q86Y07 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 AL645937.2-201ENST00000396808 931 ntBASIC13.99□□□□□ -0.17
VRK2Q86Y07 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 AC134915.1-201ENST00000426461 574 ntBASIC13.99□□□□□ -0.17
VRK2Q86Y07 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 AC093004.1-201ENST00000508850 424 ntBASIC13.99□□□□□ -0.17
VRK2Q86Y07 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 AC055876.2-201ENST00000531834 546 ntBASIC13.99□□□□□ -0.17
VRK2Q86Y07 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 AC120045.2-201ENST00000567334 178 ntBASIC13.99□□□□□ -0.17
VRK2Q86Y07 SPDYE22P-201ENST00000582158 798 ntBASIC13.99□□□□□ -0.17
VRK2Q86Y07 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 BX539320.1-201ENST00000623759 877 ntBASIC13.99□□□□□ -0.17
VRK2Q86Y07 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.99□□□□□ -0.17
VRK2Q86Y07 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VRK2Q86Y07 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms