Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 AC131206.1-201ENST00000538078 1211 ntBASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 DUX4L46-201ENST00000566845 751 ntBASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 AC020914.3-201ENST00000594712 304 ntBASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 AC009955.4-201ENST00000597192 544 ntBASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 BX088702.1-201ENST00000610784 235 ntBASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 FER1L4-210ENST00000615531 5998 ntBASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC27A1Q6PCB7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 AC006058.4-201ENST00000624016 1670 ntBASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 E2F3P2-201ENST00000447755 1422 ntBASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 GCOM2-201ENST00000509133 1104 ntBASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 SCARNA20.5-201ENST00000516991 142 ntBASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 AC100827.2-201ENST00000563214 1194 ntBASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 MIR4783-201ENST00000580343 82 ntBASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 AL451050.2-201ENST00000606967 682 ntBASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 AL162426.1-201ENST00000624141 743 ntBASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 AL139099.5-201ENST00000635274 300 ntBASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 AC138028.6-201ENST00000616106 1482 ntBASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC27A1Q6PCB7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms