Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40P25942 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CD40P25942 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40P25942 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40P25942 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40P25942 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40P25942 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CD40P25942 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13□□□□□ -0.33
CD40P25942 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13□□□□□ -0.33
CD40P25942 AC105917.1-201ENST00000506637 2539 ntBASIC13□□□□□ -0.33
CD40P25942 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13□□□□□ -0.33
CD40P25942 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CD40P25942 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD40P25942 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13□□□□□ -0.33
CD40P25942 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CD40P25942 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CD40P25942 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13□□□□□ -0.33
CD40P25942 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 AP000593.2-201ENST00000542775 1433 ntBASIC13□□□□□ -0.33
CD40P25942 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13□□□□□ -0.33
CD40P25942 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 AL136309.1-201ENST00000403917 691 ntBASIC13□□□□□ -0.33
CD40P25942 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13□□□□□ -0.33
CD40P25942 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13□□□□□ -0.33
CD40P25942 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 AL591846.1-201ENST00000451736 433 ntBASIC13□□□□□ -0.33
CD40P25942 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13□□□□□ -0.33
CD40P25942 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13□□□□□ -0.33
CD40P25942 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13□□□□□ -0.33
CD40P25942 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13□□□□□ -0.33
CD40P25942 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD40P25942 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13□□□□□ -0.33
CD40P25942 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD40P25942 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13□□□□□ -0.33
CD40P25942 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD40P25942 AC243960.2-201ENST00000600996 747 ntBASIC13□□□□□ -0.33
CD40P25942 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
CD40P25942 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13□□□□□ -0.33
CD40P25942 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CD40P25942 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CD40P25942 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CD40P25942 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.99□□□□□ -0.33
CD40P25942 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.99□□□□□ -0.33
CD40P25942 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 AC020907.1-201ENST00000616460 1350 ntBASIC12.99□□□□□ -0.33
CD40P25942 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.99□□□□□ -0.33
CD40P25942 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.99□□□□□ -0.33
CD40P25942 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD40P25942 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.99□□□□□ -0.33
CD40P25942 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.99□□□□□ -0.33
CD40P25942 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.99□□□□□ -0.33
CD40P25942 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.99□□□□□ -0.33
CD40P25942 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.99□□□□□ -0.33
CD40P25942 AC104306.2-201ENST00000451877 341 ntBASIC12.99□□□□□ -0.33
CD40P25942 AC022494.1-201ENST00000466044 728 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms