Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.98□□□□□ -0.33
TNFSF4P23510 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.98□□□□□ -0.33
TNFSF4P23510 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.98□□□□□ -0.33
TNFSF4P23510 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
TNFSF4P23510 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
TNFSF4P23510 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.98□□□□□ -0.33
TNFSF4P23510 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 AC234783.1-201ENST00000441761 496 ntBASIC12.98□□□□□ -0.33
TNFSF4P23510 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 GPR53P-205ENST00000457298 1084 ntBASIC12.98□□□□□ -0.33
TNFSF4P23510 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.98□□□□□ -0.33
TNFSF4P23510 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.98□□□□□ -0.33
TNFSF4P23510 BTNL10-201ENST00000595971 695 ntBASIC12.98□□□□□ -0.33
TNFSF4P23510 AC008735.3-201ENST00000596646 500 ntBASIC12.98□□□□□ -0.33
TNFSF4P23510 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.98□□□□□ -0.33
TNFSF4P23510 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.98□□□□□ -0.33
TNFSF4P23510 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.98□□□□□ -0.33
TNFSF4P23510 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.98□□□□□ -0.33
TNFSF4P23510 PRSS30P-206ENST00000641773 873 ntBASIC12.98□□□□□ -0.33
TNFSF4P23510 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.98□□□□□ -0.33
TNFSF4P23510 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.97□□□□□ -0.33
TNFSF4P23510 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TNFSF4P23510 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 KRT8P14-201ENST00000414254 1442 ntBASIC12.97□□□□□ -0.33
TNFSF4P23510 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.97□□□□□ -0.33
TNFSF4P23510 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
TNFSF4P23510 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.97□□□□□ -0.33
TNFSF4P23510 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TNFSF4P23510 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 AC104640.1-201ENST00000562617 2109 ntBASIC12.97□□□□□ -0.33
TNFSF4P23510 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TNFSF4P23510 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TNFSF4P23510 RNU1-114P-201ENST00000365297 166 ntBASIC12.97□□□□□ -0.33
TNFSF4P23510 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
TNFSF4P23510 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.97□□□□□ -0.33
TNFSF4P23510 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 ACTBP8-201ENST00000403258 1108 ntBASIC12.97□□□□□ -0.33
TNFSF4P23510 BOLA2P3-201ENST00000404566 256 ntBASIC12.97□□□□□ -0.33
TNFSF4P23510 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.97□□□□□ -0.33
TNFSF4P23510 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.97□□□□□ -0.33
TNFSF4P23510 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.97□□□□□ -0.33
TNFSF4P23510 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TNFSF4P23510 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.97□□□□□ -0.33
TNFSF4P23510 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TNFSF4P23510 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
TNFSF4P23510 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.97□□□□□ -0.33
TNFSF4P23510 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.97□□□□□ -0.33
TNFSF4P23510 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.97□□□□□ -0.33
TNFSF4P23510 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.97□□□□□ -0.33
TNFSF4P23510 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TNFSF4P23510 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.97□□□□□ -0.33
TNFSF4P23510 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
TNFSF4P23510 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TNFSF4P23510 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms