Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB4AP20338 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB4AP20338 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
RAB4AP20338 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB4AP20338 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.67□□□□□ -0.54
RAB4AP20338 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.67□□□□□ -0.54
RAB4AP20338 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB4AP20338 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
RAB4AP20338 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.67□□□□□ -0.54
RAB4AP20338 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.67□□□□□ -0.54
RAB4AP20338 HMGN1P19-201ENST00000436976 333 ntBASIC11.67□□□□□ -0.54
RAB4AP20338 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB4AP20338 AC104819.1-201ENST00000504587 486 ntBASIC11.67□□□□□ -0.54
RAB4AP20338 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 AP002414.4-201ENST00000589764 1148 ntBASIC11.67□□□□□ -0.54
RAB4AP20338 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.67□□□□□ -0.54
RAB4AP20338 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 AL139288.1-201ENST00000623748 933 ntBASIC11.67□□□□□ -0.54
RAB4AP20338 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB4AP20338 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB4AP20338 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB4AP20338 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB4AP20338 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB4AP20338 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB4AP20338 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.66□□□□□ -0.54
RAB4AP20338 AC012569.1-201ENST00000591191 1524 ntBASIC11.66□□□□□ -0.54
RAB4AP20338 CICP7-201ENST00000432723 2477 ntBASIC11.66□□□□□ -0.54
RAB4AP20338 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RAB4AP20338 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB4AP20338 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.66□□□□□ -0.54
RAB4AP20338 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RAB4AP20338 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 AP001282.1-201ENST00000531301 1499 ntBASIC11.66□□□□□ -0.54
RAB4AP20338 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB4AP20338 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RAB4AP20338 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 AP002383.4-201ENST00000442518 975 ntBASIC11.66□□□□□ -0.54
RAB4AP20338 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.66□□□□□ -0.54
RAB4AP20338 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB4AP20338 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.66□□□□□ -0.54
RAB4AP20338 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.66□□□□□ -0.54
RAB4AP20338 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB4AP20338 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.66□□□□□ -0.54
RAB4AP20338 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.66□□□□□ -0.54
RAB4AP20338 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms